Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm27331-201ENSMUST00000183705 60 ntBASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Gm37720-201ENSMUST00000195497 1241 ntBASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Gm37922-201ENSMUST00000195596 455 ntBASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Gm29705-201ENSMUST00000212598 474 ntBASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa3Q3UPR0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Gm18062-201ENSMUST00000208020 547 ntBASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Gm18055-201ENSMUST00000208254 547 ntBASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa3Q3UPR0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa3Q3UPR0 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa3Q3UPR0 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa3Q3UPR0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa3Q3UPR0 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa3Q3UPR0 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms