Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Gm15236-201ENSMUST00000117309 379 ntBASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Gm2383-201ENSMUST00000181461 807 ntBASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Gm17812-201ENSMUST00000204935 318 ntBASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Gm5455-201ENSMUST00000058710 715 ntBASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Gm14208-201ENSMUST00000119645 678 ntBASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Gm24749-201ENSMUST00000157838 343 ntBASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Gm5616-201ENSMUST00000165252 384 ntBASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Gm8741-201ENSMUST00000174736 384 ntBASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Gm43962-201ENSMUST00000203898 190 ntBASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.79□□□□□ -0.36
Nlrc4Q3UP24 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Gm5419-201ENSMUST00000119301 527 ntBASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Gm5706-201ENSMUST00000181525 993 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms