Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cks1brtQ3UNC9 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Cks1brtQ3UNC9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC8.69□□□□□ -1.02
Cks1brtQ3UNC9 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cks1brtQ3UNC9 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cks1brtQ3UNC9 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cks1brtQ3UNC9 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Cks1brtQ3UNC9 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cks1brtQ3UNC9 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Gm12485-201ENSMUST00000119641 291 ntBASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Gm12428-201ENSMUST00000119844 727 ntBASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Gm46209-201ENSMUST00000217912 553 ntBASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Gm5628-201ENSMUST00000222318 1049 ntBASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Gm24447-201ENSMUST00000083977 338 ntBASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC8.68□□□□□ -1.02
Cks1brtQ3UNC9 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Gm11400-201ENSMUST00000120853 1214 ntBASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Gm11745-201ENSMUST00000121669 448 ntBASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC8.67□□□□□ -1.02
Cks1brtQ3UNC9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms