Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Gm27826-201ENSMUST00000175282 255 ntBASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Gm3635-201ENSMUST00000212314 354 ntBASIC11.14□□□□□ -0.63
Spg11Q3UHA3 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Gm15615-201ENSMUST00000118876 198 ntBASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.13□□□□□ -0.63
Spg11Q3UHA3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Gm43966-201ENSMUST00000203301 612 ntBASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Gm11660-201ENSMUST00000120955 412 ntBASIC11.13□□□□□ -0.63
Spg11Q3UHA3 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Gm6612-201ENSMUST00000170777 395 ntBASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Spg11Q3UHA3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Gm11475-201ENSMUST00000118482 476 ntBASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Gm8019-201ENSMUST00000119317 587 ntBASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms