Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Gm14277-201ENSMUST00000121195 360 ntBASIC14.31□□□□□ -0.12
Limch1Q3UH68 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.31□□□□□ -0.12
Limch1Q3UH68 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Gm27046-201ENSMUST00000182160 463 ntBASIC14.31□□□□□ -0.12
Limch1Q3UH68 Mir6979-201ENSMUST00000183927 56 ntBASIC14.31□□□□□ -0.12
Limch1Q3UH68 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.31□□□□□ -0.12
Limch1Q3UH68 Gm8885-201ENSMUST00000189382 598 ntBASIC14.31□□□□□ -0.12
Limch1Q3UH68 Gm42937-201ENSMUST00000197360 752 ntBASIC14.31□□□□□ -0.12
Limch1Q3UH68 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.31□□□□□ -0.12
Limch1Q3UH68 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
Limch1Q3UH68 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limch1Q3UH68 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Gm14109-201ENSMUST00000118814 309 ntBASIC14.3□□□□□ -0.12
Limch1Q3UH68 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.3□□□□□ -0.12
Limch1Q3UH68 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.3□□□□□ -0.12
Limch1Q3UH68 Gm19208-201ENSMUST00000213861 912 ntBASIC14.3□□□□□ -0.12
Limch1Q3UH68 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.3□□□□□ -0.12
Limch1Q3UH68 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.3□□□□□ -0.12
Limch1Q3UH68 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limch1Q3UH68 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 B9d1os-201ENSMUST00000137010 674 ntBASIC14.29□□□□□ -0.12
Limch1Q3UH68 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Gm3096-201ENSMUST00000185770 364 ntBASIC14.29□□□□□ -0.12
Limch1Q3UH68 Gm35960-201ENSMUST00000202712 767 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms