Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.24□□□□□ -0.13
Col5a2Q3U962 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.24□□□□□ -0.13
Col5a2Q3U962 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.24□□□□□ -0.13
Col5a2Q3U962 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
Col5a2Q3U962 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Gm5555-201ENSMUST00000120352 1111 ntBASIC14.24□□□□□ -0.13
Col5a2Q3U962 Gm14395-201ENSMUST00000120494 563 ntBASIC14.24□□□□□ -0.13
Col5a2Q3U962 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Gm25604-201ENSMUST00000158359 133 ntBASIC14.24□□□□□ -0.13
Col5a2Q3U962 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.24□□□□□ -0.13
Col5a2Q3U962 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Gm9192-201ENSMUST00000183221 985 ntBASIC14.24□□□□□ -0.13
Col5a2Q3U962 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Gm6450-201ENSMUST00000200896 574 ntBASIC14.24□□□□□ -0.13
Col5a2Q3U962 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC14.24□□□□□ -0.13
Col5a2Q3U962 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.24□□□□□ -0.13
Col5a2Q3U962 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col5a2Q3U962 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col5a2Q3U962 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Gm5340-201ENSMUST00000203733 880 ntBASIC14.23□□□□□ -0.13
Col5a2Q3U962 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 CT009527.1-201ENSMUST00000224205 339 ntBASIC14.23□□□□□ -0.13
Col5a2Q3U962 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col5a2Q3U962 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Col5a2Q3U962 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col5a2Q3U962 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col5a2Q3U962 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col5a2Q3U962 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Col5a2Q3U962 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col5a2Q3U962 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.22□□□□□ -0.13
Col5a2Q3U962 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col5a2Q3U962 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col5a2Q3U962 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.22□□□□□ -0.13
Col5a2Q3U962 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Col5a2Q3U962 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col5a2Q3U962 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col5a2Q3U962 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col5a2Q3U962 Gm14213-201ENSMUST00000119778 768 ntBASIC14.22□□□□□ -0.13
Col5a2Q3U962 Gm12274-201ENSMUST00000120062 385 ntBASIC14.22□□□□□ -0.13
Col5a2Q3U962 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms