Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
Q3U1D9 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Q3U1D9 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.57□□□□□ -0.72
Q3U1D9 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.57□□□□□ -0.72
Q3U1D9 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.57□□□□□ -0.72
Q3U1D9 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.57□□□□□ -0.72
Q3U1D9 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.57□□□□□ -0.72
Q3U1D9 Spcs1-203ENSMUST00000226374 592 ntBASIC10.57□□□□□ -0.72
Q3U1D9 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Q3U1D9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Q3U1D9 Gm21811-201ENSMUST00000096485 930 ntBASIC10.57□□□□□ -0.72
Q3U1D9 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Q3U1D9 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Q3U1D9 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Q3U1D9 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Q3U1D9 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Q3U1D9 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Q3U1D9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Q3U1D9 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Q3U1D9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Q3U1D9 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.57□□□□□ -0.72
Q3U1D9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Q3U1D9 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Q3U1D9 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Q3U1D9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Q3U1D9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Q3U1D9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.56□□□□□ -0.72
Q3U1D9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.56□□□□□ -0.72
Q3U1D9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Q3U1D9 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Q3U1D9 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.56□□□□□ -0.72
Q3U1D9 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.56□□□□□ -0.72
Q3U1D9 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.56□□□□□ -0.72
Q3U1D9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.56□□□□□ -0.72
Q3U1D9 Gm8956-201ENSMUST00000203939 825 ntBASIC10.56□□□□□ -0.72
Q3U1D9 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.56□□□□□ -0.72
Q3U1D9 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.56□□□□□ -0.72
Q3U1D9 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Q3U1D9 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.56□□□□□ -0.72
Q3U1D9 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.56□□□□□ -0.72
Q3U1D9 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Q3U1D9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Q3U1D9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Q3U1D9 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Q3U1D9 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Q3U1D9 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Q3U1D9 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Q3U1D9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.55□□□□□ -0.72
Q3U1D9 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Q3U1D9 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Q3U1D9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.55□□□□□ -0.72
Q3U1D9 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Q3U1D9 Gm23596-201ENSMUST00000104304 132 ntBASIC10.55□□□□□ -0.72
Q3U1D9 Gm14058-201ENSMUST00000116082 735 ntBASIC10.55□□□□□ -0.72
Q3U1D9 Gm12196-201ENSMUST00000120954 262 ntBASIC10.55□□□□□ -0.72
Q3U1D9 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.55□□□□□ -0.72
Q3U1D9 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.55□□□□□ -0.72
Q3U1D9 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Q3U1D9 Gm25881-201ENSMUST00000157783 103 ntBASIC10.55□□□□□ -0.72
Q3U1D9 Gm8343-201ENSMUST00000182705 994 ntBASIC10.55□□□□□ -0.72
Q3U1D9 Gm4034-201ENSMUST00000187674 480 ntBASIC10.55□□□□□ -0.72
Q3U1D9 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Q3U1D9 Gm8959-201ENSMUST00000213150 571 ntBASIC10.55□□□□□ -0.72
Q3U1D9 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Q3U1D9 Gm807-202ENSMUST00000224929 408 ntBASIC10.55□□□□□ -0.72
Q3U1D9 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Q3U1D9 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Q3U1D9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Q3U1D9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Q3U1D9 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.55□□□□□ -0.72
Q3U1D9 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Q3U1D9 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Q3U1D9 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Q3U1D9 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms