Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim6Q3U0I6 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Smim6Q3U0I6 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim6Q3U0I6 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim6Q3U0I6 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim6Q3U0I6 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim6Q3U0I6 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim6Q3U0I6 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim6Q3U0I6 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smim6Q3U0I6 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Smim6Q3U0I6 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Smim6Q3U0I6 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim6Q3U0I6 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim6Q3U0I6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim6Q3U0I6 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smim6Q3U0I6 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smim6Q3U0I6 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.41□□□□□ -0.9
Smim6Q3U0I6 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Gm42929-201ENSMUST00000198374 1286 ntBASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 CT010486.3-201ENSMUST00000224555 811 ntBASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 n-R5s77-201ENSMUST00000083757 119 ntBASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim6Q3U0I6 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smim6Q3U0I6 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smim6Q3U0I6 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Smim6Q3U0I6 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Smim6Q3U0I6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smim6Q3U0I6 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Smim6Q3U0I6 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smim6Q3U0I6 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.91
Smim6Q3U0I6 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smim6Q3U0I6 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smim6Q3U0I6 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Smim6Q3U0I6 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smim6Q3U0I6 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smim6Q3U0I6 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Smim6Q3U0I6 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Smim6Q3U0I6 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.4□□□□□ -0.91
Smim6Q3U0I6 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.39□□□□□ -0.91
Smim6Q3U0I6 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smim6Q3U0I6 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim6Q3U0I6 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smim6Q3U0I6 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim6Q3U0I6 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smim6Q3U0I6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smim6Q3U0I6 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim6Q3U0I6 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.39□□□□□ -0.91
Smim6Q3U0I6 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim6Q3U0I6 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim6Q3U0I6 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms