Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox4Q06831 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox4Q06831 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.96□□□□□ -0.49
Sox4Q06831 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sox4Q06831 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox4Q06831 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox4Q06831 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Sox4Q06831 Gm29199-201ENSMUST00000187766 775 ntBASIC11.96□□□□□ -0.49
Sox4Q06831 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.96□□□□□ -0.49
Sox4Q06831 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Sox4Q06831 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox4Q06831 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.96□□□□□ -0.49
Sox4Q06831 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox4Q06831 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sox4Q06831 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.96□□□□□ -0.49
Sox4Q06831 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox4Q06831 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox4Q06831 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.96□□□□□ -0.5
Sox4Q06831 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox4Q06831 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Sox4Q06831 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.96□□□□□ -0.5
Sox4Q06831 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Sox4Q06831 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Sox4Q06831 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox4Q06831 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox4Q06831 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox4Q06831 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox4Q06831 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox4Q06831 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox4Q06831 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox4Q06831 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.95□□□□□ -0.5
Sox4Q06831 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sox4Q06831 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Sox4Q06831 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sox4Q06831 Gm14208-201ENSMUST00000119645 678 ntBASIC11.95□□□□□ -0.5
Sox4Q06831 Gm14017-201ENSMUST00000121934 386 ntBASIC11.95□□□□□ -0.5
Sox4Q06831 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Sox4Q06831 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Gm2260-201ENSMUST00000184965 657 ntBASIC11.95□□□□□ -0.5
Sox4Q06831 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.95□□□□□ -0.5
Sox4Q06831 Gm45433-201ENSMUST00000209386 247 ntBASIC11.95□□□□□ -0.5
Sox4Q06831 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.95□□□□□ -0.5
Sox4Q06831 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.95□□□□□ -0.5
Sox4Q06831 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.95□□□□□ -0.5
Sox4Q06831 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox4Q06831 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Sox4Q06831 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox4Q06831 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sox4Q06831 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox4Q06831 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms