Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm24830-201ENSMUST00000102024 166 ntBASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm24934-201ENSMUST00000103764 111 ntBASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.23□□□□□ -0.45
Pfdn6Q03958 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.23□□□□□ -0.45
Pfdn6Q03958 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm2546-201ENSMUST00000182630 991 ntBASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm37489-201ENSMUST00000191883 159 ntBASIC12.23□□□□□ -0.45
Pfdn6Q03958 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm39404-201ENSMUST00000216350 313 ntBASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.23□□□□□ -0.45
Pfdn6Q03958 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm26232-201ENSMUST00000083360 166 ntBASIC12.23□□□□□ -0.45
Pfdn6Q03958 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.23□□□□□ -0.45
Pfdn6Q03958 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Pfdn6Q03958 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.23□□□□□ -0.45
Pfdn6Q03958 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.23□□□□□ -0.45
Pfdn6Q03958 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.23□□□□□ -0.45
Pfdn6Q03958 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.22□□□□□ -0.45
Pfdn6Q03958 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.22□□□□□ -0.45
Pfdn6Q03958 Map1b-203ENSMUST00000223725 2669 ntBASIC12.22□□□□□ -0.45
Pfdn6Q03958 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Gm22018-201ENSMUST00000104357 131 ntBASIC12.22□□□□□ -0.45
Pfdn6Q03958 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Gm13316-201ENSMUST00000140537 691 ntBASIC12.22□□□□□ -0.45
Pfdn6Q03958 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Gm17420-201ENSMUST00000164753 153 ntBASIC12.22□□□□□ -0.45
Pfdn6Q03958 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.22□□□□□ -0.45
Pfdn6Q03958 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn6Q03958 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms