Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.39□□□□□ -0.75
Smn1P97801 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.39□□□□□ -0.75
Smn1P97801 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.39□□□□□ -0.75
Smn1P97801 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Gm29705-201ENSMUST00000212598 474 ntBASIC10.39□□□□□ -0.75
Smn1P97801 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.39□□□□□ -0.75
Smn1P97801 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.39□□□□□ -0.75
Smn1P97801 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.39□□□□□ -0.75
Smn1P97801 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Smn1P97801 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Smn1P97801 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Smn1P97801 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.38□□□□□ -0.75
Smn1P97801 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Smn1P97801 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.38□□□□□ -0.75
Smn1P97801 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.38□□□□□ -0.75
Smn1P97801 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.38□□□□□ -0.75
Smn1P97801 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.38□□□□□ -0.75
Smn1P97801 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.38□□□□□ -0.75
Smn1P97801 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Smn1P97801 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Smn1P97801 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Smn1P97801 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.38□□□□□ -0.75
Smn1P97801 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Smn1P97801 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Gm6244-201ENSMUST00000178732 841 ntBASIC10.38□□□□□ -0.75
Smn1P97801 Gm24196-201ENSMUST00000179161 110 ntBASIC10.38□□□□□ -0.75
Smn1P97801 Gm8652-201ENSMUST00000181363 964 ntBASIC10.38□□□□□ -0.75
Smn1P97801 Gm18304-201ENSMUST00000189162 546 ntBASIC10.38□□□□□ -0.75
Smn1P97801 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC10.38□□□□□ -0.75
Smn1P97801 Gm9908-201ENSMUST00000211534 448 ntBASIC10.38□□□□□ -0.75
Smn1P97801 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC10.38□□□□□ -0.75
Smn1P97801 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.38□□□□□ -0.75
Smn1P97801 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.38□□□□□ -0.75
Smn1P97801 Gm6180-201ENSMUST00000065243 498 ntBASIC10.38□□□□□ -0.75
Smn1P97801 Gm10012-201ENSMUST00000078252 192 ntBASIC10.38□□□□□ -0.75
Smn1P97801 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Smn1P97801 Gm5356-201ENSMUST00000093326 615 ntBASIC10.38□□□□□ -0.75
Smn1P97801 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.38□□□□□ -0.75
Smn1P97801 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.38□□□□□ -0.75
Smn1P97801 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Smn1P97801 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Smn1P97801 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Smn1P97801 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smn1P97801 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.38□□□□□ -0.75
Smn1P97801 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.38□□□□□ -0.75
Smn1P97801 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Smn1P97801 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smn1P97801 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smn1P97801 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smn1P97801 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smn1P97801 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.37□□□□□ -0.75
Smn1P97801 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smn1P97801 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smn1P97801 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smn1P97801 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms