Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43bP86448 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43bP86448 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trim43bP86448 Cog3-203ENSMUST00000227473 4197 ntBASIC12.52□□□□□ -0.41
Trim43bP86448 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.52□□□□□ -0.41
Trim43bP86448 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43bP86448 Gm6023-201ENSMUST00000118217 606 ntBASIC12.52□□□□□ -0.41
Trim43bP86448 Gm12241-201ENSMUST00000118330 726 ntBASIC12.52□□□□□ -0.41
Trim43bP86448 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim43bP86448 Gm44364-201ENSMUST00000198368 141 ntBASIC12.52□□□□□ -0.41
Trim43bP86448 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim43bP86448 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.52□□□□□ -0.41
Trim43bP86448 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim43bP86448 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim43bP86448 Gm9368-201ENSMUST00000219348 831 ntBASIC12.52□□□□□ -0.41
Trim43bP86448 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43bP86448 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43bP86448 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43bP86448 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim43bP86448 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43bP86448 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43bP86448 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trim43bP86448 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43bP86448 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43bP86448 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43bP86448 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
Trim43bP86448 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43bP86448 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43bP86448 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43bP86448 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43bP86448 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43bP86448 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim43bP86448 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43bP86448 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43bP86448 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim43bP86448 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.51□□□□□ -0.41
Trim43bP86448 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Trim43bP86448 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim43bP86448 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trim43bP86448 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim43bP86448 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim43bP86448 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim43bP86448 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.51□□□□□ -0.41
Trim43bP86448 Gm15703-201ENSMUST00000120250 880 ntBASIC12.51□□□□□ -0.41
Trim43bP86448 Gm14704-201ENSMUST00000120300 874 ntBASIC12.51□□□□□ -0.41
Trim43bP86448 Gm12363-201ENSMUST00000122250 668 ntBASIC12.51□□□□□ -0.41
Trim43bP86448 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trim43bP86448 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim43bP86448 Gm22121-201ENSMUST00000175148 54 ntBASIC12.51□□□□□ -0.41
Trim43bP86448 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim43bP86448 Mospd4-201ENSMUST00000180618 576 ntBASIC12.51□□□□□ -0.41
Trim43bP86448 Mir6420-201ENSMUST00000185032 102 ntBASIC12.51□□□□□ -0.41
Trim43bP86448 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.51□□□□□ -0.41
Trim43bP86448 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trim43bP86448 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim43bP86448 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.51□□□□□ -0.41
Trim43bP86448 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.51□□□□□ -0.41
Trim43bP86448 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43bP86448 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim43bP86448 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim43bP86448 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim43bP86448 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms