Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm14130-201ENSMUST00000118417 987 ntBASIC10.88□□□□□ -0.67
SgcbP82349 Gm15808-201ENSMUST00000119046 604 ntBASIC10.88□□□□□ -0.67
SgcbP82349 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.88□□□□□ -0.67
SgcbP82349 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 Gm6963-201ENSMUST00000147879 379 ntBASIC10.88□□□□□ -0.67
SgcbP82349 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.88□□□□□ -0.67
SgcbP82349 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 AA914427-201ENSMUST00000193194 1166 ntBASIC10.88□□□□□ -0.67
SgcbP82349 Rprl1-202ENSMUST00000198476 238 ntBASIC10.88□□□□□ -0.67
SgcbP82349 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.88□□□□□ -0.67
SgcbP82349 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC10.88□□□□□ -0.67
SgcbP82349 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.88□□□□□ -0.67
SgcbP82349 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC10.88□□□□□ -0.67
SgcbP82349 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.88□□□□□ -0.67
SgcbP82349 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
SgcbP82349 AC154757.2-201ENSMUST00000228885 743 ntBASIC10.88□□□□□ -0.67
SgcbP82349 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.88□□□□□ -0.67
SgcbP82349 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SgcbP82349 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SgcbP82349 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SgcbP82349 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.88□□□□□ -0.67
SgcbP82349 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.88□□□□□ -0.67
SgcbP82349 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
SgcbP82349 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
SgcbP82349 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
SgcbP82349 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
SgcbP82349 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
SgcbP82349 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
SgcbP82349 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Gm12015-201ENSMUST00000117065 843 ntBASIC10.87□□□□□ -0.67
SgcbP82349 Gm13296-201ENSMUST00000117854 997 ntBASIC10.87□□□□□ -0.67
SgcbP82349 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.87□□□□□ -0.67
SgcbP82349 Gm25700-201ENSMUST00000177693 110 ntBASIC10.87□□□□□ -0.67
SgcbP82349 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
SgcbP82349 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.87□□□□□ -0.67
SgcbP82349 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.87□□□□□ -0.67
SgcbP82349 Gm38241-201ENSMUST00000192641 898 ntBASIC10.87□□□□□ -0.67
SgcbP82349 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.87□□□□□ -0.67
SgcbP82349 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
SgcbP82349 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.87□□□□□ -0.67
SgcbP82349 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.87□□□□□ -0.67
SgcbP82349 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.87□□□□□ -0.67
SgcbP82349 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.87□□□□□ -0.67
SgcbP82349 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
SgcbP82349 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
SgcbP82349 Mir433-201ENSMUST00000093564 124 ntBASIC10.87□□□□□ -0.67
SgcbP82349 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
SgcbP82349 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
SgcbP82349 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.87□□□□□ -0.67
SgcbP82349 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.87□□□□□ -0.67
SgcbP82349 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcbP82349 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
SgcbP82349 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.86□□□□□ -0.67
SgcbP82349 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms