Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Msx3P70354 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Msx3P70354 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Msx3P70354 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.48□□□□□ -0.41
Msx3P70354 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Msx3P70354 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Msx3P70354 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Msx3P70354 Gm12742-201ENSMUST00000117326 410 ntBASIC12.48□□□□□ -0.41
Msx3P70354 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.48□□□□□ -0.41
Msx3P70354 Gm13297-201ENSMUST00000120205 934 ntBASIC12.48□□□□□ -0.41
Msx3P70354 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.48□□□□□ -0.41
Msx3P70354 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.48□□□□□ -0.41
Msx3P70354 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Msx3P70354 Gm5706-201ENSMUST00000181525 993 ntBASIC12.48□□□□□ -0.41
Msx3P70354 Gm26956-201ENSMUST00000182176 986 ntBASIC12.48□□□□□ -0.41
Msx3P70354 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.48□□□□□ -0.41
Msx3P70354 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.48□□□□□ -0.41
Msx3P70354 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.48□□□□□ -0.41
Msx3P70354 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Msx3P70354 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Msx3P70354 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.48□□□□□ -0.41
Msx3P70354 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msx3P70354 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.47□□□□□ -0.41
Msx3P70354 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Msx3P70354 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx3P70354 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx3P70354 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.47□□□□□ -0.41
Msx3P70354 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msx3P70354 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.47□□□□□ -0.41
Msx3P70354 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx3P70354 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.47□□□□□ -0.41
Msx3P70354 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.47□□□□□ -0.41
Msx3P70354 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msx3P70354 Gm17420-201ENSMUST00000164753 153 ntBASIC12.47□□□□□ -0.41
Msx3P70354 Gm27572-201ENSMUST00000183702 255 ntBASIC12.47□□□□□ -0.41
Msx3P70354 Gm6013-201ENSMUST00000212264 699 ntBASIC12.47□□□□□ -0.41
Msx3P70354 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.47□□□□□ -0.41
Msx3P70354 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msx3P70354 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.47□□□□□ -0.41
Msx3P70354 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.47□□□□□ -0.41
Msx3P70354 Gm9823-201ENSMUST00000051212 327 ntBASIC12.47□□□□□ -0.41
Msx3P70354 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx3P70354 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx3P70354 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.47□□□□□ -0.41
Msx3P70354 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msx3P70354 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx3P70354 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx3P70354 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Msx3P70354 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx3P70354 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msx3P70354 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msx3P70354 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.47□□□□□ -0.41
Msx3P70354 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.46□□□□□ -0.41
Msx3P70354 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.46□□□□□ -0.41
Msx3P70354 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.46□□□□□ -0.41
Msx3P70354 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.46□□□□□ -0.41
Msx3P70354 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms