Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.41□□□□□ -0.26
Hmgb1P63158 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb1P63158 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb1P63158 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb1P63158 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb1P63158 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb1P63158 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb1P63158 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.41□□□□□ -0.26
Hmgb1P63158 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb1P63158 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb1P63158 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Hmgb1P63158 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb1P63158 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb1P63158 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb1P63158 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb1P63158 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Gm37593-201ENSMUST00000191669 3254 ntBASIC13.4□□□□□ -0.26
Hmgb1P63158 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Hmgb1P63158 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.4□□□□□ -0.26
Hmgb1P63158 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.4□□□□□ -0.26
Hmgb1P63158 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.4□□□□□ -0.26
Hmgb1P63158 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.4□□□□□ -0.26
Hmgb1P63158 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.4□□□□□ -0.26
Hmgb1P63158 Gm42937-201ENSMUST00000197360 752 ntBASIC13.4□□□□□ -0.26
Hmgb1P63158 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.4□□□□□ -0.26
Hmgb1P63158 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.4□□□□□ -0.26
Hmgb1P63158 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.4□□□□□ -0.26
Hmgb1P63158 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Hmgb1P63158 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Hmgb1P63158 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.4□□□□□ -0.26
Hmgb1P63158 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Hmgb1P63158 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Hmgb1P63158 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgb1P63158 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Hmgb1P63158 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Hmgb1P63158 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.39□□□□□ -0.27
Hmgb1P63158 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Hmgb1P63158 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Gm12036-201ENSMUST00000120008 530 ntBASIC13.39□□□□□ -0.27
Hmgb1P63158 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.39□□□□□ -0.27
Hmgb1P63158 Gm27514-201ENSMUST00000183692 110 ntBASIC13.39□□□□□ -0.27
Hmgb1P63158 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Hmgb1P63158 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.39□□□□□ -0.27
Hmgb1P63158 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.39□□□□□ -0.27
Hmgb1P63158 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.39□□□□□ -0.27
Hmgb1P63158 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Hmgb1P63158 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Hmgb1P63158 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgb1P63158 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Hmgb1P63158 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgb1P63158 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgb1P63158 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgb1P63158 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgb1P63158 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 117.2 ms