Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Lhx1P63006 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lhx1P63006 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lhx1P63006 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.93□□□□□ -0.5
Lhx1P63006 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.93□□□□□ -0.5
Lhx1P63006 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lhx1P63006 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lhx1P63006 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.93□□□□□ -0.5
Lhx1P63006 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Lhx1P63006 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.93□□□□□ -0.5
Lhx1P63006 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lhx1P63006 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Lhx1P63006 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.93□□□□□ -0.5
Lhx1P63006 Gm12164-201ENSMUST00000121695 551 ntBASIC11.93□□□□□ -0.5
Lhx1P63006 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.93□□□□□ -0.5
Lhx1P63006 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.93□□□□□ -0.5
Lhx1P63006 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Lhx1P63006 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.93□□□□□ -0.5
Lhx1P63006 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Lhx1P63006 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.93□□□□□ -0.5
Lhx1P63006 Gm26448-201ENSMUST00000082446 203 ntBASIC11.93□□□□□ -0.5
Lhx1P63006 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Lhx1P63006 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.93□□□□□ -0.5
Lhx1P63006 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.93□□□□□ -0.5
Lhx1P63006 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lhx1P63006 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.93□□□□□ -0.5
Lhx1P63006 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Lhx1P63006 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx1P63006 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx1P63006 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx1P63006 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.92□□□□□ -0.5
Lhx1P63006 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx1P63006 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Lhx1P63006 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx1P63006 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.92□□□□□ -0.5
Lhx1P63006 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx1P63006 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx1P63006 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx1P63006 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx1P63006 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx1P63006 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx1P63006 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx1P63006 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.92□□□□□ -0.5
Lhx1P63006 Gm27552-201ENSMUST00000183351 62 ntBASIC11.92□□□□□ -0.5
Lhx1P63006 Gm27844-201ENSMUST00000183613 62 ntBASIC11.92□□□□□ -0.5
Lhx1P63006 Mir7070-201ENSMUST00000183657 86 ntBASIC11.92□□□□□ -0.5
Lhx1P63006 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.92□□□□□ -0.5
Lhx1P63006 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.92□□□□□ -0.5
Lhx1P63006 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx1P63006 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.92□□□□□ -0.5
Lhx1P63006 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.92□□□□□ -0.5
Lhx1P63006 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx1P63006 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx1P63006 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
Lhx1P63006 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx1P63006 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx1P63006 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.92□□□□□ -0.5
Lhx1P63006 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx1P63006 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.91□□□□□ -0.5
Lhx1P63006 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lhx1P63006 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.91□□□□□ -0.5
Lhx1P63006 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms