Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.08□□□□□ -0.8
Lsm5P62322 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm5P62322 Gm6152-201ENSMUST00000151704 340 ntBASIC10.08□□□□□ -0.8
Lsm5P62322 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.08□□□□□ -0.8
Lsm5P62322 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm5P62322 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm5P62322 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm5P62322 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm5P62322 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm5P62322 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm5P62322 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Lsm5P62322 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.08□□□□□ -0.8
Lsm5P62322 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Lsm5P62322 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Lsm5P62322 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm5P62322 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm5P62322 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm5P62322 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm5P62322 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm5P62322 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm5P62322 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Lsm5P62322 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.08□□□□□ -0.8
Lsm5P62322 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.08□□□□□ -0.8
Lsm5P62322 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm5P62322 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm5P62322 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Lsm5P62322 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Lsm5P62322 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Lsm5P62322 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.07□□□□□ -0.8
Lsm5P62322 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.07□□□□□ -0.8
Lsm5P62322 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.07□□□□□ -0.8
Lsm5P62322 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Lsm5P62322 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Lsm5P62322 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Lsm5P62322 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.07□□□□□ -0.8
Lsm5P62322 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.07□□□□□ -0.8
Lsm5P62322 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.07□□□□□ -0.8
Lsm5P62322 Gm2213-201ENSMUST00000197485 688 ntBASIC10.07□□□□□ -0.8
Lsm5P62322 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Lsm5P62322 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.07□□□□□ -0.8
Lsm5P62322 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.07□□□□□ -0.8
Lsm5P62322 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Lsm5P62322 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Lsm5P62322 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Lsm5P62322 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm5P62322 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.06□□□□□ -0.8
Lsm5P62322 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm5P62322 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.06□□□□□ -0.8
Lsm5P62322 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm5P62322 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm5P62322 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm5P62322 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.06□□□□□ -0.8
Lsm5P62322 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm5P62322 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm5P62322 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm5P62322 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm5P62322 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm5P62322 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm5P62322 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Lsm5P62322 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm5P62322 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Lsm5P62322 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
Lsm5P62322 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm5P62322 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm5P62322 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm5P62322 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm5P62322 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Lsm5P62322 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Lsm5P62322 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm5P62322 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.06□□□□□ -0.8
Lsm5P62322 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Lsm5P62322 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm5P62322 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms