Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Sf3b6P59708 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.79□□□□□ -0.68
Sf3b6P59708 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.79□□□□□ -0.68
Sf3b6P59708 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Sf3b6P59708 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sf3b6P59708 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.79□□□□□ -0.68
Sf3b6P59708 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Gm12363-201ENSMUST00000122250 668 ntBASIC10.79□□□□□ -0.68
Sf3b6P59708 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.79□□□□□ -0.68
Sf3b6P59708 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.79□□□□□ -0.68
Sf3b6P59708 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.79□□□□□ -0.68
Sf3b6P59708 Gm21156-201ENSMUST00000189693 869 ntBASIC10.79□□□□□ -0.68
Sf3b6P59708 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.79□□□□□ -0.68
Sf3b6P59708 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.79□□□□□ -0.68
Sf3b6P59708 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.79□□□□□ -0.68
Sf3b6P59708 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sf3b6P59708 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sf3b6P59708 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sf3b6P59708 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.79□□□□□ -0.68
Sf3b6P59708 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
Sf3b6P59708 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.79□□□□□ -0.68
Sf3b6P59708 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sf3b6P59708 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Sf3b6P59708 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Sf3b6P59708 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.78□□□□□ -0.68
Sf3b6P59708 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.78□□□□□ -0.68
Sf3b6P59708 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Sf3b6P59708 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.78□□□□□ -0.68
Sf3b6P59708 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Gm13315-201ENSMUST00000120376 991 ntBASIC10.78□□□□□ -0.68
Sf3b6P59708 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.78□□□□□ -0.68
Sf3b6P59708 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.78□□□□□ -0.68
Sf3b6P59708 Gm9136-201ENSMUST00000193368 454 ntBASIC10.78□□□□□ -0.68
Sf3b6P59708 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.78□□□□□ -0.68
Sf3b6P59708 Gm6266-201ENSMUST00000203844 806 ntBASIC10.78□□□□□ -0.68
Sf3b6P59708 Gm4768-201ENSMUST00000206199 686 ntBASIC10.78□□□□□ -0.68
Sf3b6P59708 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.78□□□□□ -0.68
Sf3b6P59708 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Gm10012-201ENSMUST00000078252 192 ntBASIC10.78□□□□□ -0.68
Sf3b6P59708 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Sf3b6P59708 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.78□□□□□ -0.68
Sf3b6P59708 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.78□□□□□ -0.68
Sf3b6P59708 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.78□□□□□ -0.68
Sf3b6P59708 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sf3b6P59708 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.77□□□□□ -0.68
Sf3b6P59708 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Sf3b6P59708 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sf3b6P59708 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sf3b6P59708 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.77□□□□□ -0.68
Sf3b6P59708 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms