Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nphp4P59240 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC16.29■□□□□ 0.2
Nphp4P59240 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nphp4P59240 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nphp4P59240 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nphp4P59240 AC122840.1-201ENSMUST00000220915 3334 ntBASIC16.29■□□□□ 0.2
Nphp4P59240 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nphp4P59240 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nphp4P59240 Gm44421-201ENSMUST00000205064 1221 ntBASIC16.29■□□□□ 0.2
Nphp4P59240 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC16.29■□□□□ 0.2
Nphp4P59240 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC16.29■□□□□ 0.2
Nphp4P59240 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nphp4P59240 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nphp4P59240 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nphp4P59240 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nphp4P59240 Gm19692-201ENSMUST00000203856 2084 ntBASIC16.29■□□□□ 0.2
Nphp4P59240 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nphp4P59240 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nphp4P59240 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nphp4P59240 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nphp4P59240 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC16.29■□□□□ 0.2
Nphp4P59240 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nphp4P59240 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nphp4P59240 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nphp4P59240 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nphp4P59240 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nphp4P59240 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nphp4P59240 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Gm23272-201ENSMUST00000104053 129 ntBASIC16.28■□□□□ 0.2
Nphp4P59240 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC16.28■□□□□ 0.2
Nphp4P59240 Gm11451-201ENSMUST00000118946 630 ntBASIC16.28■□□□□ 0.2
Nphp4P59240 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC16.28■□□□□ 0.2
Nphp4P59240 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Nphp4P59240 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC16.28■□□□□ 0.2
Nphp4P59240 AC165260.2-203ENSMUST00000224237 336 ntBASIC16.28■□□□□ 0.2
Nphp4P59240 AC118639.2-201ENSMUST00000226289 223 ntBASIC16.28■□□□□ 0.2
Nphp4P59240 AC122350.1-201ENSMUST00000228135 533 ntBASIC16.28■□□□□ 0.2
Nphp4P59240 Gm6430-201ENSMUST00000054664 1248 ntBASIC16.28■□□□□ 0.2
Nphp4P59240 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Nphp4P59240 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Nphp4P59240 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Nphp4P59240 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC16.28■□□□□ 0.2
Nphp4P59240 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nphp4P59240 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC16.28■□□□□ 0.2
Nphp4P59240 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC16.28■□□□□ 0.2
Nphp4P59240 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC16.28■□□□□ 0.2
Nphp4P59240 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC16.28■□□□□ 0.2
Nphp4P59240 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Gm27910-201ENSMUST00000185004 107 ntBASIC16.28■□□□□ 0.2
Nphp4P59240 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC16.28■□□□□ 0.2
Nphp4P59240 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Nphp4P59240 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC16.28■□□□□ 0.2
Nphp4P59240 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nphp4P59240 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Nphp4P59240 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nphp4P59240 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC16.27■□□□□ 0.2
Nphp4P59240 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nphp4P59240 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC16.27■□□□□ 0.2
Nphp4P59240 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC16.27■□□□□ 0.2
Nphp4P59240 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nphp4P59240 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nphp4P59240 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Nphp4P59240 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nphp4P59240 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nphp4P59240 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nphp4P59240 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nphp4P59240 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nphp4P59240 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nphp4P59240 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nphp4P59240 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Nphp4P59240 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nphp4P59240 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nphp4P59240 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nphp4P59240 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nphp4P59240 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nphp4P59240 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Nphp4P59240 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC16.27■□□□□ 0.19
Nphp4P59240 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nphp4P59240 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC16.27■□□□□ 0.19
Nphp4P59240 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC16.27■□□□□ 0.19
Nphp4P59240 Gm44329-201ENSMUST00000197469 112 ntBASIC16.27■□□□□ 0.19
Nphp4P59240 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 493 ms