Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Tpm1P58771 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.53□□□□□ -0.24
Tpm1P58771 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.53□□□□□ -0.24
Tpm1P58771 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Tpm1P58771 Gm12203-201ENSMUST00000118235 598 ntBASIC13.53□□□□□ -0.24
Tpm1P58771 Gm13492-201ENSMUST00000119772 665 ntBASIC13.53□□□□□ -0.24
Tpm1P58771 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Tpm1P58771 Gm12209-201ENSMUST00000120089 596 ntBASIC13.53□□□□□ -0.24
Tpm1P58771 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.53□□□□□ -0.24
Tpm1P58771 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.53□□□□□ -0.24
Tpm1P58771 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Gm27331-201ENSMUST00000183705 60 ntBASIC13.53□□□□□ -0.24
Tpm1P58771 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.53□□□□□ -0.24
Tpm1P58771 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Gm6007-201ENSMUST00000208170 823 ntBASIC13.53□□□□□ -0.24
Tpm1P58771 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.53□□□□□ -0.24
Tpm1P58771 Gm10146-201ENSMUST00000072739 309 ntBASIC13.53□□□□□ -0.24
Tpm1P58771 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Tpm1P58771 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Tpm1P58771 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.53□□□□□ -0.24
Tpm1P58771 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.53□□□□□ -0.24
Tpm1P58771 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Tpm1P58771 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.53□□□□□ -0.24
Tpm1P58771 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.53□□□□□ -0.24
Tpm1P58771 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Tpm1P58771 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tpm1P58771 Gm18262-201ENSMUST00000222560 1946 ntBASIC13.52□□□□□ -0.24
Tpm1P58771 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tpm1P58771 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tpm1P58771 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Tpm1P58771 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tpm1P58771 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tpm1P58771 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.52□□□□□ -0.24
Tpm1P58771 BC043934-202ENSMUST00000185694 2356 ntBASIC13.52□□□□□ -0.24
Tpm1P58771 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tpm1P58771 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tpm1P58771 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tpm1P58771 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.52□□□□□ -0.24
Tpm1P58771 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tpm1P58771 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tpm1P58771 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Tpm1P58771 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Tpm1P58771 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Tpm1P58771 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.52□□□□□ -0.25
Tpm1P58771 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.52□□□□□ -0.25
Tpm1P58771 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.52□□□□□ -0.25
Tpm1P58771 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 Gm18018-201ENSMUST00000198273 408 ntBASIC13.52□□□□□ -0.25
Tpm1P58771 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.52□□□□□ -0.25
Tpm1P58771 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.52□□□□□ -0.25
Tpm1P58771 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Tpm1P58771 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Tpm1P58771 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.52□□□□□ -0.25
Tpm1P58771 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.52□□□□□ -0.25
Tpm1P58771 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tpm1P58771 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Tpm1P58771 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.51□□□□□ -0.25
Tpm1P58771 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.51□□□□□ -0.25
Tpm1P58771 Gm43622-201ENSMUST00000200140 2019 ntBASIC13.51□□□□□ -0.25
Tpm1P58771 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms