Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sssca1P56873 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
Sssca1P56873 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Sssca1P56873 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Sssca1P56873 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sssca1P56873 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sssca1P56873 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Sssca1P56873 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sssca1P56873 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.81□□□□□ -0.84
Sssca1P56873 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sssca1P56873 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sssca1P56873 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sssca1P56873 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Sssca1P56873 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Sssca1P56873 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.8□□□□□ -0.84
Sssca1P56873 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.8□□□□□ -0.84
Sssca1P56873 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.8□□□□□ -0.84
Sssca1P56873 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.8□□□□□ -0.84
Sssca1P56873 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.8□□□□□ -0.84
Sssca1P56873 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
Sssca1P56873 Mup-ps23-201ENSMUST00000118063 630 ntBASIC9.8□□□□□ -0.84
Sssca1P56873 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC9.8□□□□□ -0.84
Sssca1P56873 Gm8652-201ENSMUST00000181363 964 ntBASIC9.8□□□□□ -0.84
Sssca1P56873 Gm27486-201ENSMUST00000184923 80 ntBASIC9.8□□□□□ -0.84
Sssca1P56873 Gm27892-201ENSMUST00000185017 106 ntBASIC9.8□□□□□ -0.84
Sssca1P56873 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC9.8□□□□□ -0.84
Sssca1P56873 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC9.8□□□□□ -0.84
Sssca1P56873 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.8□□□□□ -0.84
Sssca1P56873 Gm5904-201ENSMUST00000210286 865 ntBASIC9.8□□□□□ -0.84
Sssca1P56873 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Sssca1P56873 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Sssca1P56873 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
Sssca1P56873 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.8□□□□□ -0.84
Sssca1P56873 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Sssca1P56873 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Sssca1P56873 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.8□□□□□ -0.84
Sssca1P56873 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.8□□□□□ -0.84
Sssca1P56873 Gm3287-205ENSMUST00000228893 1332 ntBASIC9.8□□□□□ -0.84
Sssca1P56873 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Sssca1P56873 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sssca1P56873 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Sssca1P56873 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
Sssca1P56873 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.79□□□□□ -0.84
Sssca1P56873 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.79□□□□□ -0.84
Sssca1P56873 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC9.79□□□□□ -0.84
Sssca1P56873 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.79□□□□□ -0.84
Sssca1P56873 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.79□□□□□ -0.84
Sssca1P56873 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC9.79□□□□□ -0.84
Sssca1P56873 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC9.79□□□□□ -0.84
Sssca1P56873 Gm24644-201ENSMUST00000157114 139 ntBASIC9.79□□□□□ -0.84
Sssca1P56873 Gm23119-201ENSMUST00000158610 140 ntBASIC9.79□□□□□ -0.84
Sssca1P56873 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms