Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cldn18P56857 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.87□□□□□ -0.67
Cldn18P56857 Map1b-203ENSMUST00000223725 2669 ntBASIC10.87□□□□□ -0.67
Cldn18P56857 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cldn18P56857 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.87□□□□□ -0.67
Cldn18P56857 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Cldn18P56857 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.87□□□□□ -0.67
Cldn18P56857 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.87□□□□□ -0.67
Cldn18P56857 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Gm14130-201ENSMUST00000118417 987 ntBASIC10.87□□□□□ -0.67
Cldn18P56857 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.87□□□□□ -0.67
Cldn18P56857 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Gm5706-201ENSMUST00000181525 993 ntBASIC10.87□□□□□ -0.67
Cldn18P56857 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.87□□□□□ -0.67
Cldn18P56857 Gm44262-201ENSMUST00000204969 372 ntBASIC10.87□□□□□ -0.67
Cldn18P56857 Gm8913-201ENSMUST00000209491 641 ntBASIC10.87□□□□□ -0.67
Cldn18P56857 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.87□□□□□ -0.67
Cldn18P56857 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.87□□□□□ -0.67
Cldn18P56857 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.87□□□□□ -0.67
Cldn18P56857 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.87□□□□□ -0.67
Cldn18P56857 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
Cldn18P56857 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cldn18P56857 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.87□□□□□ -0.67
Cldn18P56857 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cldn18P56857 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Matn2-203ENSMUST00000226766 3252 ntBASIC10.87□□□□□ -0.67
Cldn18P56857 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn18P56857 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cldn18P56857 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.86□□□□□ -0.67
Cldn18P56857 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn18P56857 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.86□□□□□ -0.67
Cldn18P56857 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cldn18P56857 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.86□□□□□ -0.67
Cldn18P56857 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.86□□□□□ -0.67
Cldn18P56857 Gm13996-201ENSMUST00000118456 430 ntBASIC10.86□□□□□ -0.67
Cldn18P56857 Gm15808-201ENSMUST00000119046 604 ntBASIC10.86□□□□□ -0.67
Cldn18P56857 Gm5419-201ENSMUST00000119301 527 ntBASIC10.86□□□□□ -0.67
Cldn18P56857 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cldn18P56857 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.86□□□□□ -0.67
Cldn18P56857 Gm43962-201ENSMUST00000203898 190 ntBASIC10.86□□□□□ -0.67
Cldn18P56857 Gm17931-201ENSMUST00000208132 634 ntBASIC10.86□□□□□ -0.67
Cldn18P56857 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn18P56857 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.86□□□□□ -0.67
Cldn18P56857 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.86□□□□□ -0.67
Cldn18P56857 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.86□□□□□ -0.67
Cldn18P56857 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.86□□□□□ -0.67
Cldn18P56857 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Gm5455-201ENSMUST00000058710 715 ntBASIC10.86□□□□□ -0.67
Cldn18P56857 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn18P56857 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.86□□□□□ -0.67
Cldn18P56857 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.86□□□□□ -0.67
Cldn18P56857 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn18P56857 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms