Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lim2P56563 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.15□□□□□ -0.46
Lim2P56563 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lim2P56563 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lim2P56563 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lim2P56563 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lim2P56563 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lim2P56563 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.15□□□□□ -0.46
Lim2P56563 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lim2P56563 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Lim2P56563 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lim2P56563 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Lim2P56563 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Lim2P56563 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lim2P56563 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.14□□□□□ -0.47
Lim2P56563 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.14□□□□□ -0.47
Lim2P56563 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.14□□□□□ -0.47
Lim2P56563 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.14□□□□□ -0.47
Lim2P56563 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Gm26361-201ENSMUST00000158868 186 ntBASIC12.14□□□□□ -0.47
Lim2P56563 Gm9230-201ENSMUST00000188228 532 ntBASIC12.14□□□□□ -0.47
Lim2P56563 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.14□□□□□ -0.47
Lim2P56563 Gm19187-201ENSMUST00000206781 892 ntBASIC12.14□□□□□ -0.47
Lim2P56563 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.14□□□□□ -0.47
Lim2P56563 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.14□□□□□ -0.47
Lim2P56563 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.14□□□□□ -0.47
Lim2P56563 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.14□□□□□ -0.47
Lim2P56563 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.14□□□□□ -0.47
Lim2P56563 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lim2P56563 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lim2P56563 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lim2P56563 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.13□□□□□ -0.47
Lim2P56563 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.13□□□□□ -0.47
Lim2P56563 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lim2P56563 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.13□□□□□ -0.47
Lim2P56563 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lim2P56563 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lim2P56563 Gm14130-201ENSMUST00000118417 987 ntBASIC12.13□□□□□ -0.47
Lim2P56563 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.13□□□□□ -0.47
Lim2P56563 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.13□□□□□ -0.47
Lim2P56563 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lim2P56563 Gm32999-201ENSMUST00000192693 562 ntBASIC12.13□□□□□ -0.47
Lim2P56563 Gm18056-201ENSMUST00000207670 568 ntBASIC12.13□□□□□ -0.47
Lim2P56563 Gm45224-201ENSMUST00000208203 414 ntBASIC12.13□□□□□ -0.47
Lim2P56563 Gm18061-201ENSMUST00000208350 562 ntBASIC12.13□□□□□ -0.47
Lim2P56563 Gm18063-201ENSMUST00000208529 568 ntBASIC12.13□□□□□ -0.47
Lim2P56563 Gm18052-201ENSMUST00000208750 559 ntBASIC12.13□□□□□ -0.47
Lim2P56563 Gm45598-202ENSMUST00000210719 986 ntBASIC12.13□□□□□ -0.47
Lim2P56563 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.13□□□□□ -0.47
Lim2P56563 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.13□□□□□ -0.47
Lim2P56563 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Lim2P56563 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.13□□□□□ -0.47
Lim2P56563 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.13□□□□□ -0.47
Lim2P56563 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms