Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Gm37201-201ENSMUST00000191845 523 ntBASIC11.61□□□□□ -0.55
Cdkn2bP55271 Gm18711-201ENSMUST00000199341 750 ntBASIC11.61□□□□□ -0.55
Cdkn2bP55271 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.61□□□□□ -0.55
Cdkn2bP55271 Snora73a-201ENSMUST00000082453 205 ntBASIC11.61□□□□□ -0.55
Cdkn2bP55271 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cdkn2bP55271 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.6□□□□□ -0.55
Cdkn2bP55271 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.6□□□□□ -0.55
Cdkn2bP55271 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Gm16379-201ENSMUST00000161469 348 ntBASIC11.6□□□□□ -0.55
Cdkn2bP55271 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Gm8762-201ENSMUST00000193486 339 ntBASIC11.6□□□□□ -0.55
Cdkn2bP55271 Gm40466-201ENSMUST00000212174 422 ntBASIC11.6□□□□□ -0.55
Cdkn2bP55271 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn2bP55271 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Cdkn2bP55271 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.6□□□□□ -0.55
Cdkn2bP55271 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn2bP55271 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn2bP55271 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn2bP55271 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdkn2bP55271 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn2bP55271 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn2bP55271 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdkn2bP55271 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn2bP55271 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn2bP55271 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn2bP55271 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn2bP55271 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn2bP55271 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn2bP55271 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn2bP55271 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdkn2bP55271 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn2bP55271 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn2bP55271 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.59□□□□□ -0.55
Cdkn2bP55271 Gm13875-201ENSMUST00000120162 282 ntBASIC11.59□□□□□ -0.55
Cdkn2bP55271 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms