Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sox3P53784 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.68□□□□□ -0.54
Sox3P53784 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.68□□□□□ -0.54
Sox3P53784 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Sox3P53784 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox3P53784 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sox3P53784 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Gm13047-201ENSMUST00000117116 815 ntBASIC11.68□□□□□ -0.54
Sox3P53784 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.68□□□□□ -0.54
Sox3P53784 Gm13045-201ENSMUST00000119019 712 ntBASIC11.68□□□□□ -0.54
Sox3P53784 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox3P53784 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.68□□□□□ -0.54
Sox3P53784 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Gm25951-201ENSMUST00000175330 64 ntBASIC11.68□□□□□ -0.54
Sox3P53784 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Sox3P53784 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.68□□□□□ -0.54
Sox3P53784 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.68□□□□□ -0.54
Sox3P53784 Gm5904-201ENSMUST00000210286 865 ntBASIC11.68□□□□□ -0.54
Sox3P53784 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.68□□□□□ -0.54
Sox3P53784 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.68□□□□□ -0.54
Sox3P53784 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox3P53784 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox3P53784 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.68□□□□□ -0.54
Sox3P53784 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox3P53784 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sox3P53784 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Sox3P53784 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.67□□□□□ -0.54
Sox3P53784 Gm13888-201ENSMUST00000119148 422 ntBASIC11.67□□□□□ -0.54
Sox3P53784 Gm25043-201ENSMUST00000158604 212 ntBASIC11.67□□□□□ -0.54
Sox3P53784 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.67□□□□□ -0.54
Sox3P53784 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Gm29155-201ENSMUST00000185910 269 ntBASIC11.67□□□□□ -0.54
Sox3P53784 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.67□□□□□ -0.54
Sox3P53784 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Gm4607-201ENSMUST00000206649 577 ntBASIC11.67□□□□□ -0.54
Sox3P53784 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.67□□□□□ -0.54
Sox3P53784 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Sox3P53784 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sox3P53784 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sox3P53784 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox3P53784 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sox3P53784 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms