Protein–RNA interactions for Protein: P50571

Gabrb1, Gamma-aminobutyric acid receptor subunit beta-1, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabrb1P50571 Gm12859-201ENSMUST00000117834 427 ntBASIC10.76□□□□□ -0.69
Gabrb1P50571 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.76□□□□□ -0.69
Gabrb1P50571 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gabrb1P50571 Gm28911-201ENSMUST00000188837 117 ntBASIC10.76□□□□□ -0.69
Gabrb1P50571 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.76□□□□□ -0.69
Gabrb1P50571 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gabrb1P50571 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.76□□□□□ -0.69
Gabrb1P50571 Gm44958-201ENSMUST00000203734 736 ntBASIC10.76□□□□□ -0.69
Gabrb1P50571 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gabrb1P50571 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gabrb1P50571 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gabrb1P50571 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gabrb1P50571 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gabrb1P50571 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gabrb1P50571 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gabrb1P50571 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.76□□□□□ -0.69
Gabrb1P50571 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Gabrb1P50571 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gabrb1P50571 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gabrb1P50571 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Gabrb1P50571 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gabrb1P50571 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gabrb1P50571 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gabrb1P50571 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gabrb1P50571 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gabrb1P50571 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.75□□□□□ -0.69
Gabrb1P50571 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.75□□□□□ -0.69
Gabrb1P50571 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Gabrb1P50571 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.75□□□□□ -0.69
Gabrb1P50571 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC10.75□□□□□ -0.69
Gabrb1P50571 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.75□□□□□ -0.69
Gabrb1P50571 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.75□□□□□ -0.69
Gabrb1P50571 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.75□□□□□ -0.69
Gabrb1P50571 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.75□□□□□ -0.69
Gabrb1P50571 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.75□□□□□ -0.69
Gabrb1P50571 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC10.75□□□□□ -0.69
Gabrb1P50571 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.75□□□□□ -0.69
Gabrb1P50571 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Gabrb1P50571 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Gabrb1P50571 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.75□□□□□ -0.69
Gabrb1P50571 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Gabrb1P50571 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gabrb1P50571 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Gabrb1P50571 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gabrb1P50571 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gabrb1P50571 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Gabrb1P50571 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Gabrb1P50571 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gabrb1P50571 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.74□□□□□ -0.69
Gabrb1P50571 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.74□□□□□ -0.69
Gabrb1P50571 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gabrb1P50571 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Gabrb1P50571 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gabrb1P50571 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gabrb1P50571 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gabrb1P50571 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
Gabrb1P50571 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Gabrb1P50571 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gabrb1P50571 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.74□□□□□ -0.69
Gabrb1P50571 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Gabrb1P50571 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.74□□□□□ -0.69
Gabrb1P50571 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gabrb1P50571 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gabrb1P50571 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Gabrb1P50571 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.74□□□□□ -0.69
Gabrb1P50571 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Gabrb1P50571 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.74□□□□□ -0.69
Gabrb1P50571 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Gabrb1P50571 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.74□□□□□ -0.69
Gabrb1P50571 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Gabrb1P50571 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms