Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Gm6180-201ENSMUST00000065243 498 ntBASIC10.06□□□□□ -0.8
Nkx2-1P50220 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-1P50220 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Gm14928-201ENSMUST00000120198 477 ntBASIC10.05□□□□□ -0.8
Nkx2-1P50220 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Gm23984-201ENSMUST00000157139 203 ntBASIC10.05□□□□□ -0.8
Nkx2-1P50220 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Gm38671-201ENSMUST00000200573 130 ntBASIC10.05□□□□□ -0.8
Nkx2-1P50220 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.05□□□□□ -0.8
Nkx2-1P50220 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.05□□□□□ -0.8
Nkx2-1P50220 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.05□□□□□ -0.8
Nkx2-1P50220 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.05□□□□□ -0.8
Nkx2-1P50220 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-1P50220 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Gm13612-201ENSMUST00000119276 390 ntBASIC10.04□□□□□ -0.8
Nkx2-1P50220 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.04□□□□□ -0.8
Nkx2-1P50220 Gm13123-201ENSMUST00000122173 492 ntBASIC10.04□□□□□ -0.8
Nkx2-1P50220 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Gm37042-201ENSMUST00000193816 581 ntBASIC10.04□□□□□ -0.8
Nkx2-1P50220 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Gm6745-201ENSMUST00000199216 526 ntBASIC10.04□□□□□ -0.8
Nkx2-1P50220 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Gm7287-201ENSMUST00000205267 602 ntBASIC10.04□□□□□ -0.8
Nkx2-1P50220 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms