Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
Rpl28P41105 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC8.17□□□□□ -1.1
Rpl28P41105 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Rpl28P41105 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
Rpl28P41105 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC8.17□□□□□ -1.1
Rpl28P41105 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC8.17□□□□□ -1.1
Rpl28P41105 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC8.17□□□□□ -1.1
Rpl28P41105 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Gm12960-201ENSMUST00000120017 1066 ntBASIC8.17□□□□□ -1.1
Rpl28P41105 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC8.17□□□□□ -1.1
Rpl28P41105 Gm26185-201ENSMUST00000157692 266 ntBASIC8.17□□□□□ -1.1
Rpl28P41105 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
Rpl28P41105 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC8.17□□□□□ -1.1
Rpl28P41105 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC8.17□□□□□ -1.1
Rpl28P41105 Gm9061-201ENSMUST00000182707 1006 ntBASIC8.17□□□□□ -1.1
Rpl28P41105 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC8.17□□□□□ -1.1
Rpl28P41105 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC8.17□□□□□ -1.1
Rpl28P41105 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC8.17□□□□□ -1.1
Rpl28P41105 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC8.17□□□□□ -1.1
Rpl28P41105 AC162801.1-201ENSMUST00000220612 198 ntBASIC8.17□□□□□ -1.1
Rpl28P41105 AC110817.1-201ENSMUST00000225706 605 ntBASIC8.17□□□□□ -1.1
Rpl28P41105 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Rpl28P41105 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC8.17□□□□□ -1.1
Rpl28P41105 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Rpl28P41105 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Rpl28P41105 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC8.17□□□□□ -1.1
Rpl28P41105 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Rpl28P41105 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC8.17□□□□□ -1.1
Rpl28P41105 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Rpl28P41105 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
Rpl28P41105 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC8.17□□□□□ -1.1
Rpl28P41105 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl28P41105 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Gm17244-201ENSMUST00000192482 3416 ntBASIC8.16□□□□□ -1.1
Rpl28P41105 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Rpl28P41105 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Rpl28P41105 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Rpl28P41105 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
Rpl28P41105 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC8.16□□□□□ -1.1
Rpl28P41105 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC8.16□□□□□ -1.1
Rpl28P41105 Gm11814-201ENSMUST00000119515 929 ntBASIC8.16□□□□□ -1.1
Rpl28P41105 Gm12201-201ENSMUST00000120657 1234 ntBASIC8.16□□□□□ -1.1
Rpl28P41105 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC8.16□□□□□ -1.1
Rpl28P41105 Gm2231-201ENSMUST00000125661 612 ntBASIC8.16□□□□□ -1.1
Rpl28P41105 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC8.16□□□□□ -1.1
Rpl28P41105 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC8.16□□□□□ -1.1
Rpl28P41105 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Rpl28P41105 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl28P41105 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms