Protein–RNA interactions for Protein: P35460

Ly6f, Lymphocyte antigen 6F, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6fP35460 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6fP35460 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6fP35460 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.63□□□□□ -0.55
Ly6fP35460 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6fP35460 Gm8731-201ENSMUST00000118088 412 ntBASIC11.63□□□□□ -0.55
Ly6fP35460 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6fP35460 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.63□□□□□ -0.55
Ly6fP35460 Gm9540-201ENSMUST00000188230 478 ntBASIC11.63□□□□□ -0.55
Ly6fP35460 Gm5714-201ENSMUST00000197343 566 ntBASIC11.63□□□□□ -0.55
Ly6fP35460 Gm45219-201ENSMUST00000205602 465 ntBASIC11.63□□□□□ -0.55
Ly6fP35460 Gm17931-201ENSMUST00000208132 634 ntBASIC11.63□□□□□ -0.55
Ly6fP35460 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.63□□□□□ -0.55
Ly6fP35460 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.63□□□□□ -0.55
Ly6fP35460 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6fP35460 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.63□□□□□ -0.55
Ly6fP35460 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6fP35460 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6fP35460 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ly6fP35460 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.63□□□□□ -0.55
Ly6fP35460 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6fP35460 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6fP35460 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6fP35460 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6fP35460 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6fP35460 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ly6fP35460 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6fP35460 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ly6fP35460 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Ly6fP35460 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Ly6fP35460 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 Gm13916-201ENSMUST00000117368 628 ntBASIC11.62□□□□□ -0.55
Ly6fP35460 Gm15207-201ENSMUST00000119259 442 ntBASIC11.62□□□□□ -0.55
Ly6fP35460 Gm15610-201ENSMUST00000120584 195 ntBASIC11.62□□□□□ -0.55
Ly6fP35460 Gm14585-201ENSMUST00000120713 634 ntBASIC11.62□□□□□ -0.55
Ly6fP35460 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.62□□□□□ -0.55
Ly6fP35460 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.62□□□□□ -0.55
Ly6fP35460 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.62□□□□□ -0.55
Ly6fP35460 Gm10752-201ENSMUST00000218348 729 ntBASIC11.62□□□□□ -0.55
Ly6fP35460 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.62□□□□□ -0.55
Ly6fP35460 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.62□□□□□ -0.55
Ly6fP35460 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.62□□□□□ -0.55
Ly6fP35460 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Ly6fP35460 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.62□□□□□ -0.55
Ly6fP35460 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.62□□□□□ -0.55
Ly6fP35460 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ly6fP35460 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6fP35460 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ly6fP35460 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ly6fP35460 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Gm11246-201ENSMUST00000120880 345 ntBASIC11.61□□□□□ -0.55
Ly6fP35460 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.61□□□□□ -0.55
Ly6fP35460 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.61□□□□□ -0.55
Ly6fP35460 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ly6fP35460 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ly6fP35460 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.61□□□□□ -0.55
Ly6fP35460 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.61□□□□□ -0.55
Ly6fP35460 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ly6fP35460 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6fP35460 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms