Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.44□□□□□ -0.42
Mmp13P33435 Gm24548-201ENSMUST00000158650 108 ntBASIC12.44□□□□□ -0.42
Mmp13P33435 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.44□□□□□ -0.42
Mmp13P33435 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.44□□□□□ -0.42
Mmp13P33435 Mir6420-201ENSMUST00000185032 102 ntBASIC12.44□□□□□ -0.42
Mmp13P33435 Gm44364-201ENSMUST00000198368 141 ntBASIC12.44□□□□□ -0.42
Mmp13P33435 Gm43822-201ENSMUST00000200285 476 ntBASIC12.44□□□□□ -0.42
Mmp13P33435 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.44□□□□□ -0.42
Mmp13P33435 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Mmp13P33435 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.44□□□□□ -0.42
Mmp13P33435 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Mmp13P33435 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.44□□□□□ -0.42
Mmp13P33435 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Mmp13P33435 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.43□□□□□ -0.42
Mmp13P33435 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Mmp13P33435 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Mmp13P33435 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.43□□□□□ -0.42
Mmp13P33435 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.43□□□□□ -0.42
Mmp13P33435 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Mmp13P33435 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.43□□□□□ -0.42
Mmp13P33435 Gm3961-201ENSMUST00000204425 994 ntBASIC12.43□□□□□ -0.42
Mmp13P33435 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.43□□□□□ -0.42
Mmp13P33435 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.43□□□□□ -0.42
Mmp13P33435 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Mmp13P33435 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Mmp13P33435 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.43□□□□□ -0.42
Mmp13P33435 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Mmp13P33435 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.43□□□□□ -0.42
Mmp13P33435 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp13P33435 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.42□□□□□ -0.42
Mmp13P33435 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Mmp13P33435 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Gm14723-201ENSMUST00000118686 215 ntBASIC12.42□□□□□ -0.42
Mmp13P33435 Gm4986-201ENSMUST00000119731 549 ntBASIC12.42□□□□□ -0.42
Mmp13P33435 Gm13315-201ENSMUST00000120376 991 ntBASIC12.42□□□□□ -0.42
Mmp13P33435 Gm9083-201ENSMUST00000120423 819 ntBASIC12.42□□□□□ -0.42
Mmp13P33435 Gm13786-201ENSMUST00000122371 333 ntBASIC12.42□□□□□ -0.42
Mmp13P33435 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.42□□□□□ -0.42
Mmp13P33435 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.42□□□□□ -0.42
Mmp13P33435 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.42□□□□□ -0.42
Mmp13P33435 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Mmp13P33435 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.42□□□□□ -0.42
Mmp13P33435 Gm18304-201ENSMUST00000189162 546 ntBASIC12.42□□□□□ -0.42
Mmp13P33435 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Mmp13P33435 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Gm38158-201ENSMUST00000194617 339 ntBASIC12.42□□□□□ -0.42
Mmp13P33435 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms