Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.2□□□□□ -0.46
RxrbP28704 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.2□□□□□ -0.46
RxrbP28704 Gm22331-201ENSMUST00000158066 136 ntBASIC12.2□□□□□ -0.46
RxrbP28704 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.2□□□□□ -0.46
RxrbP28704 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.2□□□□□ -0.46
RxrbP28704 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Gm19163-201ENSMUST00000223313 780 ntBASIC12.2□□□□□ -0.46
RxrbP28704 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.2□□□□□ -0.46
RxrbP28704 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RxrbP28704 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.2□□□□□ -0.46
RxrbP28704 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
RxrbP28704 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.2□□□□□ -0.46
RxrbP28704 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
RxrbP28704 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RxrbP28704 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.2□□□□□ -0.46
RxrbP28704 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RxrbP28704 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RxrbP28704 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RxrbP28704 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RxrbP28704 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.19□□□□□ -0.46
RxrbP28704 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.19□□□□□ -0.46
RxrbP28704 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RxrbP28704 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RxrbP28704 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.19□□□□□ -0.46
RxrbP28704 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RxrbP28704 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RxrbP28704 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RxrbP28704 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.19□□□□□ -0.46
RxrbP28704 Gm9083-201ENSMUST00000120423 819 ntBASIC12.19□□□□□ -0.46
RxrbP28704 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.19□□□□□ -0.46
RxrbP28704 Gm24644-201ENSMUST00000157114 139 ntBASIC12.19□□□□□ -0.46
RxrbP28704 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RxrbP28704 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.19□□□□□ -0.46
RxrbP28704 Gm27847-201ENSMUST00000183711 107 ntBASIC12.19□□□□□ -0.46
RxrbP28704 Gm27375-201ENSMUST00000183799 107 ntBASIC12.19□□□□□ -0.46
RxrbP28704 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.19□□□□□ -0.46
RxrbP28704 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RxrbP28704 Gm29705-201ENSMUST00000212598 474 ntBASIC12.19□□□□□ -0.46
RxrbP28704 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.19□□□□□ -0.46
RxrbP28704 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RxrbP28704 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.19□□□□□ -0.46
RxrbP28704 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RxrbP28704 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RxrbP28704 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RxrbP28704 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.19□□□□□ -0.46
RxrbP28704 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RxrbP28704 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RxrbP28704 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RxrbP28704 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RxrbP28704 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RxrbP28704 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RxrbP28704 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
RxrbP28704 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RxrbP28704 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.18□□□□□ -0.46
RxrbP28704 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Gm11597-201ENSMUST00000121423 964 ntBASIC12.18□□□□□ -0.46
RxrbP28704 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.18□□□□□ -0.46
RxrbP28704 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.18□□□□□ -0.46
RxrbP28704 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC12.18□□□□□ -0.46
RxrbP28704 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.18□□□□□ -0.46
RxrbP28704 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.18□□□□□ -0.46
RxrbP28704 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.18□□□□□ -0.46
RxrbP28704 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.18□□□□□ -0.46
RxrbP28704 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RxrbP28704 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RxrbP28704 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
RxrbP28704 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms