Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.13□□□□□ -0.47
Nckap1P28660 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nckap1P28660 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Nckap1P28660 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.12□□□□□ -0.47
Nckap1P28660 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nckap1P28660 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nckap1P28660 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nckap1P28660 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nckap1P28660 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nckap1P28660 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nckap1P28660 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nckap1P28660 Gm14058-201ENSMUST00000116082 735 ntBASIC12.12□□□□□ -0.47
Nckap1P28660 Gm12176-201ENSMUST00000121420 875 ntBASIC12.12□□□□□ -0.47
Nckap1P28660 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.12□□□□□ -0.47
Nckap1P28660 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nckap1P28660 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.12□□□□□ -0.47
Nckap1P28660 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.12□□□□□ -0.47
Nckap1P28660 Rprl1-201ENSMUST00000158050 327 ntBASIC12.12□□□□□ -0.47
Nckap1P28660 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.12□□□□□ -0.47
Nckap1P28660 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nckap1P28660 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nckap1P28660 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.12□□□□□ -0.47
Nckap1P28660 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.12□□□□□ -0.47
Nckap1P28660 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.12□□□□□ -0.47
Nckap1P28660 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.12□□□□□ -0.47
Nckap1P28660 Gm807-202ENSMUST00000224929 408 ntBASIC12.12□□□□□ -0.47
Nckap1P28660 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.12□□□□□ -0.47
Nckap1P28660 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.12□□□□□ -0.47
Nckap1P28660 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nckap1P28660 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nckap1P28660 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nckap1P28660 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nckap1P28660 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nckap1P28660 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Nckap1P28660 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nckap1P28660 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.12□□□□□ -0.47
Nckap1P28660 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nckap1P28660 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nckap1P28660 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.12□□□□□ -0.47
Nckap1P28660 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.12□□□□□ -0.47
Nckap1P28660 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nckap1P28660 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Pck2-205ENSMUST00000226352 2784 ntBASIC12.11□□□□□ -0.47
Nckap1P28660 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nckap1P28660 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.11□□□□□ -0.47
Nckap1P28660 Gm11511-201ENSMUST00000118146 540 ntBASIC12.11□□□□□ -0.47
Nckap1P28660 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.11□□□□□ -0.47
Nckap1P28660 Gm12196-201ENSMUST00000120954 262 ntBASIC12.11□□□□□ -0.47
Nckap1P28660 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.11□□□□□ -0.47
Nckap1P28660 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.11□□□□□ -0.47
Nckap1P28660 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nckap1P28660 Gm23699-201ENSMUST00000158835 135 ntBASIC12.11□□□□□ -0.47
Nckap1P28660 Gm9550-201ENSMUST00000161130 862 ntBASIC12.11□□□□□ -0.47
Nckap1P28660 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Nckap1P28660 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.11□□□□□ -0.47
Nckap1P28660 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.11□□□□□ -0.47
Nckap1P28660 Gm4157-201ENSMUST00000211647 679 ntBASIC12.11□□□□□ -0.47
Nckap1P28660 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.11□□□□□ -0.47
Nckap1P28660 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nckap1P28660 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.11□□□□□ -0.47
Nckap1P28660 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nckap1P28660 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.11□□□□□ -0.47
Nckap1P28660 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nckap1P28660 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nckap1P28660 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nckap1P28660 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Nckap1P28660 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nckap1P28660 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms