Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Gm12036-201ENSMUST00000120008 530 ntBASIC14.06□□□□□ -0.16
Pde6aP27664 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Pde6aP27664 Gm24749-201ENSMUST00000157838 343 ntBASIC14.06□□□□□ -0.16
Pde6aP27664 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.06□□□□□ -0.16
Pde6aP27664 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.06□□□□□ -0.16
Pde6aP27664 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.06□□□□□ -0.16
Pde6aP27664 Gm45433-201ENSMUST00000209386 247 ntBASIC14.06□□□□□ -0.16
Pde6aP27664 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.06□□□□□ -0.16
Pde6aP27664 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.06□□□□□ -0.16
Pde6aP27664 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.06□□□□□ -0.16
Pde6aP27664 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pde6aP27664 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Pde6aP27664 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.06□□□□□ -0.16
Pde6aP27664 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6aP27664 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6aP27664 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6aP27664 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pde6aP27664 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.05□□□□□ -0.16
Pde6aP27664 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6aP27664 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6aP27664 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6aP27664 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6aP27664 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6aP27664 Gm14208-201ENSMUST00000119645 678 ntBASIC14.05□□□□□ -0.16
Pde6aP27664 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.05□□□□□ -0.16
Pde6aP27664 Gm15610-201ENSMUST00000120584 195 ntBASIC14.05□□□□□ -0.16
Pde6aP27664 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6aP27664 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6aP27664 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6aP27664 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6aP27664 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pde6aP27664 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6aP27664 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6aP27664 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.05□□□□□ -0.16
Pde6aP27664 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.05□□□□□ -0.16
Pde6aP27664 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6aP27664 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6aP27664 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.05□□□□□ -0.16
Pde6aP27664 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Pde6aP27664 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6aP27664 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pde6aP27664 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pde6aP27664 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Pde6aP27664 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pde6aP27664 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pde6aP27664 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6aP27664 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6aP27664 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6aP27664 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6aP27664 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6aP27664 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6aP27664 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6aP27664 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Pde6aP27664 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.04□□□□□ -0.16
Pde6aP27664 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.04□□□□□ -0.16
Pde6aP27664 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.04□□□□□ -0.16
Pde6aP27664 Gm2383-201ENSMUST00000181461 807 ntBASIC14.04□□□□□ -0.16
Pde6aP27664 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6aP27664 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.04□□□□□ -0.16
Pde6aP27664 AY036118-201ENSMUST00000200021 923 ntBASIC14.04□□□□□ -0.16
Pde6aP27664 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.04□□□□□ -0.16
Pde6aP27664 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.04□□□□□ -0.16
Pde6aP27664 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6aP27664 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6aP27664 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6aP27664 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6aP27664 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6aP27664 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6aP27664 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Pde6aP27664 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6aP27664 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6aP27664 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pde6aP27664 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.04□□□□□ -0.16
Pde6aP27664 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pde6aP27664 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.04□□□□□ -0.16
Pde6aP27664 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pde6aP27664 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pde6aP27664 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pde6aP27664 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pde6aP27664 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pde6aP27664 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.03□□□□□ -0.16
Pde6aP27664 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Pde6aP27664 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pde6aP27664 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Gm11511-201ENSMUST00000118146 540 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms