Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
UbbP0CG49 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
UbbP0CG49 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
UbbP0CG49 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UbbP0CG49 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UbbP0CG49 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UbbP0CG49 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UbbP0CG49 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UbbP0CG49 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UbbP0CG49 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UbbP0CG49 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UbbP0CG49 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UbbP0CG49 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UbbP0CG49 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UbbP0CG49 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UbbP0CG49 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.58□□□□□ -0.72
UbbP0CG49 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
UbbP0CG49 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.57□□□□□ -0.72
UbbP0CG49 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
UbbP0CG49 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.57□□□□□ -0.72
UbbP0CG49 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
UbbP0CG49 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.57□□□□□ -0.72
UbbP0CG49 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.57□□□□□ -0.72
UbbP0CG49 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.57□□□□□ -0.72
UbbP0CG49 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.57□□□□□ -0.72
UbbP0CG49 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.57□□□□□ -0.72
UbbP0CG49 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.57□□□□□ -0.72
UbbP0CG49 Gm22331-201ENSMUST00000158066 136 ntBASIC10.57□□□□□ -0.72
UbbP0CG49 Gm23119-201ENSMUST00000158610 140 ntBASIC10.57□□□□□ -0.72
UbbP0CG49 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
UbbP0CG49 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.57□□□□□ -0.72
UbbP0CG49 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.57□□□□□ -0.72
UbbP0CG49 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
UbbP0CG49 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
UbbP0CG49 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
UbbP0CG49 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
UbbP0CG49 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.57□□□□□ -0.72
UbbP0CG49 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.57□□□□□ -0.72
UbbP0CG49 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
UbbP0CG49 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.57□□□□□ -0.72
UbbP0CG49 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
UbbP0CG49 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
UbbP0CG49 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UbbP0CG49 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
UbbP0CG49 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UbbP0CG49 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.56□□□□□ -0.72
UbbP0CG49 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
UbbP0CG49 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
UbbP0CG49 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UbbP0CG49 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UbbP0CG49 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
UbbP0CG49 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UbbP0CG49 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UbbP0CG49 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UbbP0CG49 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
UbbP0CG49 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.56□□□□□ -0.72
UbbP0CG49 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UbbP0CG49 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
UbbP0CG49 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UbbP0CG49 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UbbP0CG49 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.56□□□□□ -0.72
UbbP0CG49 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.56□□□□□ -0.72
UbbP0CG49 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.56□□□□□ -0.72
UbbP0CG49 Gm27486-201ENSMUST00000184923 80 ntBASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms