Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc8P09025 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc8P09025 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc8P09025 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Hoxc8P09025 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc8P09025 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc8P09025 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Hoxc8P09025 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Hoxc8P09025 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc8P09025 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.86□□□□□ -0.35
Hoxc8P09025 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc8P09025 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc8P09025 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.86□□□□□ -0.35
Hoxc8P09025 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Hoxc8P09025 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.85□□□□□ -0.35
Hoxc8P09025 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Hoxc8P09025 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.85□□□□□ -0.35
Hoxc8P09025 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.85□□□□□ -0.35
Hoxc8P09025 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.85□□□□□ -0.35
Hoxc8P09025 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.85□□□□□ -0.35
Hoxc8P09025 Gm13937-201ENSMUST00000121000 988 ntBASIC12.85□□□□□ -0.35
Hoxc8P09025 Gm11675-201ENSMUST00000121873 832 ntBASIC12.85□□□□□ -0.35
Hoxc8P09025 Gm14441-201ENSMUST00000121960 540 ntBASIC12.85□□□□□ -0.35
Hoxc8P09025 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.85□□□□□ -0.35
Hoxc8P09025 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.85□□□□□ -0.35
Hoxc8P09025 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.85□□□□□ -0.35
Hoxc8P09025 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.85□□□□□ -0.35
Hoxc8P09025 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.85□□□□□ -0.35
Hoxc8P09025 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Hoxc8P09025 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Hoxc8P09025 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Hoxc8P09025 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc8P09025 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Hoxc8P09025 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Hoxc8P09025 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.84□□□□□ -0.35
Hoxc8P09025 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hoxc8P09025 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.84□□□□□ -0.35
Hoxc8P09025 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Hoxc8P09025 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hoxc8P09025 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.84□□□□□ -0.35
Hoxc8P09025 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Hoxc8P09025 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Hoxc8P09025 Gm16397-201ENSMUST00000122201 494 ntBASIC12.84□□□□□ -0.35
Hoxc8P09025 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.84□□□□□ -0.35
Hoxc8P09025 Gm22442-201ENSMUST00000157256 144 ntBASIC12.84□□□□□ -0.35
Hoxc8P09025 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Hoxc8P09025 Gm6114-201ENSMUST00000182472 968 ntBASIC12.84□□□□□ -0.35
Hoxc8P09025 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Hoxc8P09025 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.84□□□□□ -0.35
Hoxc8P09025 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.84□□□□□ -0.35
Hoxc8P09025 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Hoxc8P09025 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.84□□□□□ -0.35
Hoxc8P09025 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hoxc8P09025 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Hoxc8P09025 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hoxc8P09025 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc8P09025 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Hoxc8P09025 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Hoxc8P09025 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms