Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TnfP06804 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TnfP06804 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TnfP06804 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
TnfP06804 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TnfP06804 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.86□□□□□ -0.35
TnfP06804 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
TnfP06804 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.86□□□□□ -0.35
TnfP06804 Gm37246-201ENSMUST00000192665 835 ntBASIC12.86□□□□□ -0.35
TnfP06804 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.86□□□□□ -0.35
TnfP06804 Gm4482-201ENSMUST00000200876 742 ntBASIC12.86□□□□□ -0.35
TnfP06804 Gm9555-201ENSMUST00000200908 583 ntBASIC12.86□□□□□ -0.35
TnfP06804 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.86□□□□□ -0.35
TnfP06804 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.86□□□□□ -0.35
TnfP06804 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.86□□□□□ -0.35
TnfP06804 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TnfP06804 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TnfP06804 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.86□□□□□ -0.35
TnfP06804 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TnfP06804 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
TnfP06804 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
TnfP06804 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TnfP06804 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TnfP06804 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.85□□□□□ -0.35
TnfP06804 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
TnfP06804 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.85□□□□□ -0.35
TnfP06804 Gm7851-201ENSMUST00000117574 323 ntBASIC12.85□□□□□ -0.35
TnfP06804 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.85□□□□□ -0.35
TnfP06804 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.85□□□□□ -0.35
TnfP06804 Gm11660-201ENSMUST00000120955 412 ntBASIC12.85□□□□□ -0.35
TnfP06804 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.85□□□□□ -0.35
TnfP06804 Gm8100-201ENSMUST00000182906 988 ntBASIC12.85□□□□□ -0.35
TnfP06804 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.85□□□□□ -0.35
TnfP06804 Gm8959-201ENSMUST00000213150 571 ntBASIC12.85□□□□□ -0.35
TnfP06804 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.85□□□□□ -0.35
TnfP06804 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.85□□□□□ -0.35
TnfP06804 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
TnfP06804 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TnfP06804 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.85□□□□□ -0.35
TnfP06804 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.84□□□□□ -0.35
TnfP06804 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.84□□□□□ -0.35
TnfP06804 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.84□□□□□ -0.35
TnfP06804 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.84□□□□□ -0.35
TnfP06804 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.84□□□□□ -0.35
TnfP06804 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.84□□□□□ -0.35
TnfP06804 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms