Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P01852 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P01852 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P01852 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P01852 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
P01852 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
P01852 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P01852 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.14□□□□□ -0.63
P01852 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
P01852 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
P01852 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P01852 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
P01852 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P01852 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P01852 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.14□□□□□ -0.63
P01852 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.14□□□□□ -0.63
P01852 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
P01852 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
P01852 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.13□□□□□ -0.63
P01852 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
P01852 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
P01852 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
P01852 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
P01852 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
P01852 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Mir877-201ENSMUST00000104738 85 ntBASIC11.13□□□□□ -0.63
P01852 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Gm12015-201ENSMUST00000117065 843 ntBASIC11.13□□□□□ -0.63
P01852 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.13□□□□□ -0.63
P01852 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.13□□□□□ -0.63
P01852 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.13□□□□□ -0.63
P01852 Gm4857-201ENSMUST00000192718 785 ntBASIC11.13□□□□□ -0.63
P01852 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.13□□□□□ -0.63
P01852 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.13□□□□□ -0.63
P01852 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.13□□□□□ -0.63
P01852 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Gm9996-201ENSMUST00000070359 913 ntBASIC11.13□□□□□ -0.63
P01852 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.13□□□□□ -0.63
P01852 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.13□□□□□ -0.63
P01852 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.13□□□□□ -0.63
P01852 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P01852 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
P01852 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
P01852 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
P01852 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
P01852 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
P01852 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
P01852 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.12□□□□□ -0.63
P01852 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.12□□□□□ -0.63
P01852 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.12□□□□□ -0.63
P01852 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.12□□□□□ -0.63
P01852 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Gm19187-201ENSMUST00000206781 892 ntBASIC11.12□□□□□ -0.63
P01852 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.12□□□□□ -0.63
P01852 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.12□□□□□ -0.63
P01852 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.12□□□□□ -0.63
P01852 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01852 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms