Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl13O55038 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Cxcl13O55038 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cxcl13O55038 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Cxcl13O55038 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Cxcl13O55038 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cxcl13O55038 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.26□□□□□ -0.77
Cxcl13O55038 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.26□□□□□ -0.77
Cxcl13O55038 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm12165-201ENSMUST00000117047 342 ntBASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm7851-201ENSMUST00000117574 323 ntBASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm14724-201ENSMUST00000118400 537 ntBASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm15610-201ENSMUST00000120584 195 ntBASIC10.26□□□□□ -0.77
Cxcl13O55038 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.26□□□□□ -0.77
Cxcl13O55038 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Cxcl13O55038 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm8100-201ENSMUST00000182906 988 ntBASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm28686-201ENSMUST00000187404 609 ntBASIC10.26□□□□□ -0.77
Cxcl13O55038 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm5733-201ENSMUST00000190232 939 ntBASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm2965-201ENSMUST00000198365 343 ntBASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm18893-201ENSMUST00000198416 943 ntBASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.26□□□□□ -0.77
Cxcl13O55038 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.26□□□□□ -0.77
Cxcl13O55038 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm10288-201ENSMUST00000084614 537 ntBASIC10.26□□□□□ -0.77
Cxcl13O55038 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cxcl13O55038 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.26□□□□□ -0.77
Cxcl13O55038 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Cxcl13O55038 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.26□□□□□ -0.77
Cxcl13O55038 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl13O55038 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.25□□□□□ -0.77
Cxcl13O55038 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cxcl13O55038 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Cxcl13O55038 Gm13045-201ENSMUST00000119019 712 ntBASIC10.25□□□□□ -0.77
Cxcl13O55038 Gm13408-201ENSMUST00000119822 798 ntBASIC10.25□□□□□ -0.77
Cxcl13O55038 Gm8566-201ENSMUST00000120174 465 ntBASIC10.25□□□□□ -0.77
Cxcl13O55038 Gm11660-201ENSMUST00000120955 412 ntBASIC10.25□□□□□ -0.77
Cxcl13O55038 Gm13935-201ENSMUST00000121859 798 ntBASIC10.25□□□□□ -0.77
Cxcl13O55038 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.25□□□□□ -0.77
Cxcl13O55038 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms