Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk2O35491 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk2O35491 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk2O35491 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk2O35491 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk2O35491 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk2O35491 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clk2O35491 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk2O35491 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Clk2O35491 Gm12165-201ENSMUST00000117047 342 ntBASIC13.17□□□□□ -0.3
Clk2O35491 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Clk2O35491 Gm8199-201ENSMUST00000121323 823 ntBASIC13.17□□□□□ -0.3
Clk2O35491 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.17□□□□□ -0.3
Clk2O35491 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Clk2O35491 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.17□□□□□ -0.3
Clk2O35491 Gm28686-201ENSMUST00000187404 609 ntBASIC13.17□□□□□ -0.3
Clk2O35491 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.17□□□□□ -0.3
Clk2O35491 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.17□□□□□ -0.3
Clk2O35491 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk2O35491 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.17□□□□□ -0.3
Clk2O35491 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Clk2O35491 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk2O35491 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.16□□□□□ -0.3
Clk2O35491 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Clk2O35491 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Gm24891-201ENSMUST00000104391 136 ntBASIC13.16□□□□□ -0.3
Clk2O35491 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.16□□□□□ -0.3
Clk2O35491 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.16□□□□□ -0.3
Clk2O35491 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.16□□□□□ -0.3
Clk2O35491 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.16□□□□□ -0.3
Clk2O35491 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.16□□□□□ -0.3
Clk2O35491 Gm43947-201ENSMUST00000203019 959 ntBASIC13.16□□□□□ -0.3
Clk2O35491 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.16□□□□□ -0.3
Clk2O35491 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.16□□□□□ -0.3
Clk2O35491 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.16□□□□□ -0.3
Clk2O35491 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Clk2O35491 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Clk2O35491 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Clk2O35491 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Clk2O35491 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Clk2O35491 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clk2O35491 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk2O35491 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.15□□□□□ -0.3
Clk2O35491 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clk2O35491 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk2O35491 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Clk2O35491 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clk2O35491 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk2O35491 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk2O35491 Map1b-203ENSMUST00000223725 2669 ntBASIC13.15□□□□□ -0.3
Clk2O35491 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Clk2O35491 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.15□□□□□ -0.3
Clk2O35491 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clk2O35491 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk2O35491 Gm22902-201ENSMUST00000158488 302 ntBASIC13.15□□□□□ -0.3
Clk2O35491 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Clk2O35491 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.15□□□□□ -0.3
Clk2O35491 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.15□□□□□ -0.3
Clk2O35491 Gm37246-201ENSMUST00000192665 835 ntBASIC13.15□□□□□ -0.3
Clk2O35491 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.15□□□□□ -0.3
Clk2O35491 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.15□□□□□ -0.3
Clk2O35491 Gm8959-201ENSMUST00000213150 571 ntBASIC13.15□□□□□ -0.3
Clk2O35491 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk2O35491 Gm10288-201ENSMUST00000084614 537 ntBASIC13.15□□□□□ -0.3
Clk2O35491 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Clk2O35491 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.15□□□□□ -0.3
Clk2O35491 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Clk2O35491 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk2O35491 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Clk2O35491 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clk2O35491 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk2O35491 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk2O35491 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk2O35491 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clk2O35491 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms