Protein–RNA interactions for Protein: O08786

Cckar, Cholecystokinin receptor type A, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckarO08786 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CckarO08786 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CckarO08786 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CckarO08786 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CckarO08786 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.76□□□□□ -0.69
CckarO08786 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.76□□□□□ -0.69
CckarO08786 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CckarO08786 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CckarO08786 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
CckarO08786 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CckarO08786 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CckarO08786 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CckarO08786 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CckarO08786 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CckarO08786 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CckarO08786 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.75□□□□□ -0.69
CckarO08786 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CckarO08786 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
CckarO08786 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.75□□□□□ -0.69
CckarO08786 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
CckarO08786 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
CckarO08786 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.75□□□□□ -0.69
CckarO08786 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CckarO08786 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.75□□□□□ -0.69
CckarO08786 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
CckarO08786 Gm11628-201ENSMUST00000117568 171 ntBASIC10.75□□□□□ -0.69
CckarO08786 Gm15515-201ENSMUST00000117827 822 ntBASIC10.75□□□□□ -0.69
CckarO08786 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC10.75□□□□□ -0.69
CckarO08786 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
CckarO08786 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC10.75□□□□□ -0.69
CckarO08786 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.75□□□□□ -0.69
CckarO08786 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
CckarO08786 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.75□□□□□ -0.69
CckarO08786 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC10.75□□□□□ -0.69
CckarO08786 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
CckarO08786 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.75□□□□□ -0.69
CckarO08786 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.75□□□□□ -0.69
CckarO08786 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.75□□□□□ -0.69
CckarO08786 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
CckarO08786 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CckarO08786 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CckarO08786 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
CckarO08786 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CckarO08786 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CckarO08786 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CckarO08786 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.74□□□□□ -0.69
CckarO08786 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.74□□□□□ -0.69
CckarO08786 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CckarO08786 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CckarO08786 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CckarO08786 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CckarO08786 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CckarO08786 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.74□□□□□ -0.69
CckarO08786 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.74□□□□□ -0.69
CckarO08786 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CckarO08786 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CckarO08786 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
CckarO08786 Gm14058-201ENSMUST00000116082 735 ntBASIC10.74□□□□□ -0.69
CckarO08786 Gm13045-201ENSMUST00000119019 712 ntBASIC10.74□□□□□ -0.69
CckarO08786 Gm11667-201ENSMUST00000119828 486 ntBASIC10.74□□□□□ -0.69
CckarO08786 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
CckarO08786 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CckarO08786 Gm44551-201ENSMUST00000208804 171 ntBASIC10.74□□□□□ -0.69
CckarO08786 AC140293.1-201ENSMUST00000225626 1247 ntBASIC10.74□□□□□ -0.69
CckarO08786 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.74□□□□□ -0.69
CckarO08786 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CckarO08786 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
CckarO08786 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms