Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Syngap1F6SEU4 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Gm14005-208ENSMUST00000223654 681 ntBASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Syngap1F6SEU4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Gm14644-201ENSMUST00000116671 647 ntBASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Gm7851-201ENSMUST00000117574 323 ntBASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Gm14034-201ENSMUST00000120147 551 ntBASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Gm28071-201ENSMUST00000190355 478 ntBASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.67□□□□□ -0.22
Syngap1F6SEU4 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Gm5434-202ENSMUST00000222384 1451 ntBASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Gm5434-201ENSMUST00000071825 1451 ntBASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syngap1F6SEU4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Syngap1F6SEU4 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.66□□□□□ -0.22
Syngap1F6SEU4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.66□□□□□ -0.22
Syngap1F6SEU4 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Syngap1F6SEU4 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Syngap1F6SEU4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.66□□□□□ -0.22
Syngap1F6SEU4 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Syngap1F6SEU4 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.66□□□□□ -0.22
Syngap1F6SEU4 Gm2517-201ENSMUST00000215651 348 ntBASIC13.66□□□□□ -0.22
Syngap1F6SEU4 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Syngap1F6SEU4 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms