Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Gm12291-201ENSMUST00000121627 311 ntBASIC13.34□□□□□ -0.27
Trim30cD3YVI9 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Gm42627-201ENSMUST00000197347 224 ntBASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim30cD3YVI9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim30cD3YVI9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim30cD3YVI9 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim30cD3YVI9 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim30cD3YVI9 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim30cD3YVI9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.33□□□□□ -0.27
Trim30cD3YVI9 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim30cD3YVI9 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim30cD3YVI9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Trim30cD3YVI9 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim30cD3YVI9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim30cD3YVI9 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Gm6023-201ENSMUST00000118217 606 ntBASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Gm11793-201ENSMUST00000120433 981 ntBASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Gm23363-201ENSMUST00000175024 79 ntBASIC13.33□□□□□ -0.28
Trim30cD3YVI9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Gm5781-201ENSMUST00000219792 443 ntBASIC13.33□□□□□ -0.28
Trim30cD3YVI9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim30cD3YVI9 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Gm22119-201ENSMUST00000175594 99 ntBASIC13.32□□□□□ -0.28
Trim30cD3YVI9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms