Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Gm4310-201ENSMUST00000177847 889 ntBASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Gm44329-201ENSMUST00000197469 112 ntBASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Mirlet7i-201ENSMUST00000083472 85 ntBASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Gm1848-201ENSMUST00000120711 789 ntBASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Gm23153-201ENSMUST00000175323 313 ntBASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Gm9645-201ENSMUST00000197131 792 ntBASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Gm43520-201ENSMUST00000197996 164 ntBASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.03□□□□□ -0.16
Clrn2B2RVW2 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.03□□□□□ -0.16
Clrn2B2RVW2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn2B2RVW2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Clrn2B2RVW2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Clrn2B2RVW2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clrn2B2RVW2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Clrn2B2RVW2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clrn2B2RVW2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Clrn2B2RVW2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.02□□□□□ -0.16
Clrn2B2RVW2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clrn2B2RVW2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.02□□□□□ -0.16
Clrn2B2RVW2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Clrn2B2RVW2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clrn2B2RVW2 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clrn2B2RVW2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clrn2B2RVW2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clrn2B2RVW2 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clrn2B2RVW2 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Gm22920-201ENSMUST00000102175 109 ntBASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Gm11451-201ENSMUST00000118946 630 ntBASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Gm15207-201ENSMUST00000119259 442 ntBASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Gm13328-201ENSMUST00000120816 1020 ntBASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Gm23045-201ENSMUST00000175041 96 ntBASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Gm4654-201ENSMUST00000183305 982 ntBASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Mir6998-201ENSMUST00000183343 64 ntBASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.02□□□□□ -0.17
Clrn2B2RVW2 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms