Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Syt7-204ENSMUST00000223586 1344 ntBASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Mir7654-201ENSMUST00000185082 70 ntBASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 AC139382.1-201ENSMUST00000221402 498 ntBASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Gm43321-201ENSMUST00000198897 2409 ntBASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Gm12887B1AVM1 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Gm23935-201ENSMUST00000102303 57 ntBASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Gm24270-201ENSMUST00000102326 57 ntBASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Gm11637-201ENSMUST00000120601 592 ntBASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Gm12887B1AVM1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms