Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Gm11979-201ENSMUST00000119629 743 ntBASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Gm17070-201ENSMUST00000170463 784 ntBASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Gm25604-201ENSMUST00000158359 133 ntBASIC12.24□□□□□ -0.45
Col4a6B1AVK5 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Gm28833-201ENSMUST00000189671 559 ntBASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.24□□□□□ -0.45
Col4a6B1AVK5 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col4a6B1AVK5 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Gm24791-201ENSMUST00000104284 131 ntBASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a6B1AVK5 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms