Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm38194-201ENSMUST00000194529 2211 ntBASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm43636-201ENSMUST00000201501 2235 ntBASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Crispld1-201ENSMUST00000095075 4472 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Itsn1-204ENSMUST00000113993 3787 ntTSL 5 BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm11298-201ENSMUST00000120503 1799 ntBASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm42971-201ENSMUST00000199228 2079 ntBASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Gm3880A0A1B0GSB3 Diexf-201ENSMUST00000085555 5570 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Unc13d-203ENSMUST00000106451 3973 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Unc13d-201ENSMUST00000075036 3967 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 AC160340.2-201ENSMUST00000220812 3675 ntBASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 AC123738.2-201ENSMUST00000223791 1899 ntBASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Olfr366-202ENSMUST00000214897 5333 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Igkv2-116-201ENSMUST00000199327 362 ntBASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm45328-201ENSMUST00000210942 917 ntBASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 AC156016.3-201ENSMUST00000228623 344 ntBASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 AC154352.1-201ENSMUST00000221477 2365 ntBASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Synrg-202ENSMUST00000092834 7115 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Gm3880A0A1B0GSB3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms