Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 AC124732.2-201ENSMUST00000221977 316 ntBASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 AC126408.1-201ENSMUST00000225184 523 ntBASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Rbfox2-208ENSMUST00000227930 1218 ntBASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Fgf17-202ENSMUST00000227123 1336 ntBASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 AC154314.2-201ENSMUST00000223677 3502 ntBASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav8-1A0A075B641 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 AC126262.1-201ENSMUST00000221802 1904 ntBASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Gm19692-201ENSMUST00000203856 2084 ntBASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Gm4204-201ENSMUST00000110798 1231 ntBASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Gm27321-201ENSMUST00000185021 205 ntBASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Gm17837-201ENSMUST00000186435 985 ntBASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 AC151286.1-201ENSMUST00000198489 145 ntBASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Gm43514-201ENSMUST00000198852 424 ntBASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trav8-1A0A075B641 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms