Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm15276-201ENSMUST00000145953 498 ntBASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm27046-201ENSMUST00000182160 463 ntBASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm44405-201ENSMUST00000198952 126 ntBASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Rps4l-202ENSMUST00000204242 789 ntBASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl40Q9Z2Q5 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Mir7070-201ENSMUST00000183657 86 ntBASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm45925-201ENSMUST00000218882 744 ntBASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl40Q9Z2Q5 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm11930-201ENSMUST00000117788 190 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms