Protein–RNA interactions for Protein: Q9Z1X0

Ccl27, C-C motif chemokine 27, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl27Q9Z1X0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Gm12015-201ENSMUST00000117065 843 ntBASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Gm25700-201ENSMUST00000177693 110 ntBASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl27Q9Z1X0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Gm12164-201ENSMUST00000121695 551 ntBASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Gm27320-201ENSMUST00000184892 109 ntBASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccl27Q9Z1X0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl27Q9Z1X0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl27Q9Z1X0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl27Q9Z1X0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Ccl27Q9Z1X0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl27Q9Z1X0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl27Q9Z1X0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms