Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cdh17Q9R100 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.85□□□□□ -0.51
Cdh17Q9R100 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.84□□□□□ -0.51
Cdh17Q9R100 Gm14247-201ENSMUST00000120950 237 ntBASIC11.84□□□□□ -0.51
Cdh17Q9R100 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.84□□□□□ -0.51
Cdh17Q9R100 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Gm24845-201ENSMUST00000158034 109 ntBASIC11.84□□□□□ -0.51
Cdh17Q9R100 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdh17Q9R100 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.84□□□□□ -0.51
Cdh17Q9R100 Gm2546-201ENSMUST00000182630 991 ntBASIC11.84□□□□□ -0.51
Cdh17Q9R100 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Gm37008-201ENSMUST00000195712 319 ntBASIC11.84□□□□□ -0.51
Cdh17Q9R100 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.84□□□□□ -0.51
Cdh17Q9R100 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh17Q9R100 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Cdh17Q9R100 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cdh17Q9R100 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.51
Cdh17Q9R100 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cdh17Q9R100 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cdh17Q9R100 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cdh17Q9R100 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cdh17Q9R100 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cdh17Q9R100 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.83□□□□□ -0.52
Cdh17Q9R100 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Gm10434-201ENSMUST00000101158 471 ntBASIC11.83□□□□□ -0.52
Cdh17Q9R100 Gm23931-201ENSMUST00000103842 109 ntBASIC11.83□□□□□ -0.52
Cdh17Q9R100 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Gm14832-201ENSMUST00000121289 322 ntBASIC11.83□□□□□ -0.52
Cdh17Q9R100 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Gm38158-201ENSMUST00000194617 339 ntBASIC11.83□□□□□ -0.52
Cdh17Q9R100 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.83□□□□□ -0.52
Cdh17Q9R100 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.83□□□□□ -0.52
Cdh17Q9R100 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.83□□□□□ -0.52
Cdh17Q9R100 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Cdh17Q9R100 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms